Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm25962-201ENSMUST00000157173 168 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm24438-201ENSMUST00000157893 115 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm6726-201ENSMUST00000172786 681 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Mir6341-201ENSMUST00000183490 121 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm28871-201ENSMUST00000186191 687 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Vmn1r82-202ENSMUST00000191002 918 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm9504-201ENSMUST00000196322 468 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm43576-201ENSMUST00000197937 871 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Ighv1-68-201ENSMUST00000198789 294 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 AC166263.1-201ENSMUST00000218586 238 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm2099-201ENSMUST00000220979 412 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm26384-201ENSMUST00000102183 110 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm22374-201ENSMUST00000104583 132 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Igkv13-87-201ENSMUST00000114214 286 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm14513-201ENSMUST00000117403 123 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm12717-201ENSMUST00000118427 983 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm22158-201ENSMUST00000158411 126 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm22569-201ENSMUST00000175545 124 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm28846-201ENSMUST00000189161 368 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm412-201ENSMUST00000193360 948 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm42958-201ENSMUST00000197595 318 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm17906-201ENSMUST00000202480 901 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 AC127279.1-201ENSMUST00000220140 637 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Ap3m1-208ENSMUST00000224016 764 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 AC107369.1-201ENSMUST00000227373 860 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 AW822073-201ENSMUST00000075305 555 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm23238-201ENSMUST00000083007 164 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf1Q69ZI1 AC120153.1-201ENSMUST00000226502 1311 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms