Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm18348-201ENSMUST00000191227 820 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm36991-201ENSMUST00000191800 648 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm20770-201ENSMUST00000193474 694 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm45845-201ENSMUST00000207326 582 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm4012-201ENSMUST00000221504 581 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 AV026068-237ENSMUST00000226075 572 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm23459-201ENSMUST00000083259 131 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm25758-201ENSMUST00000103987 129 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm24429-201ENSMUST00000104076 132 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm6620-201ENSMUST00000120113 715 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm13488-201ENSMUST00000120419 179 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm17014-201ENSMUST00000120765 168 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm5383-201ENSMUST00000121177 617 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm11805-201ENSMUST00000121238 600 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Mir3080-201ENSMUST00000175010 79 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm42542-201ENSMUST00000197978 268 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm18215-201ENSMUST00000204429 798 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm18468-201ENSMUST00000207321 369 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm18470-201ENSMUST00000207467 420 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm18465-201ENSMUST00000207468 369 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm18464-201ENSMUST00000207803 420 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm18458-201ENSMUST00000207908 369 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm18461-201ENSMUST00000208421 420 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Upf3bQ3ULL6 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm7206-201ENSMUST00000117730 508 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm9429-201ENSMUST00000117804 868 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm12422-201ENSMUST00000121431 302 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm23354-201ENSMUST00000158426 104 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Mir5128-201ENSMUST00000175217 84 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm2325-201ENSMUST00000186637 581 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm6137-201ENSMUST00000187552 578 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm37421-201ENSMUST00000193088 132 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm44221-201ENSMUST00000203552 388 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm17984-201ENSMUST00000205286 859 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm33601-201ENSMUST00000210001 961 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm21041-201ENSMUST00000214829 823 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 151.2 ms