Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox9Q04887 Gm19174-201ENSMUST00000216944 956 ntBASIC6.29□□□□□ -1.4
Sox9Q04887 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.29□□□□□ -1.4
Sox9Q04887 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.29□□□□□ -1.4
Sox9Q04887 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC6.29□□□□□ -1.4
Sox9Q04887 AC154510.1-201ENSMUST00000223925 737 ntBASIC6.29□□□□□ -1.4
Sox9Q04887 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sox9Q04887 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sox9Q04887 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox9Q04887 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sox9Q04887 Gm23623-201ENSMUST00000082461 107 ntBASIC6.29□□□□□ -1.4
Sox9Q04887 Gm22300-201ENSMUST00000082661 126 ntBASIC6.29□□□□□ -1.4
Sox9Q04887 Mir463-201ENSMUST00000093570 75 ntBASIC6.29□□□□□ -1.4
Sox9Q04887 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sox9Q04887 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sox9Q04887 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Sox9Q04887 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Sox9Q04887 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Sox9Q04887 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox9Q04887 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox9Q04887 Gm19176-201ENSMUST00000222149 1831 ntBASIC6.29□□□□□ -1.4
Sox9Q04887 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.29□□□□□ -1.4
Sox9Q04887 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sox9Q04887 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sox9Q04887 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox9Q04887 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox9Q04887 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox9Q04887 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sox9Q04887 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Sox9Q04887 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sox9Q04887 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox9Q04887 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox9Q04887 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox9Q04887 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox9Q04887 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox9Q04887 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox9Q04887 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sox9Q04887 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sox9Q04887 Gm23948-201ENSMUST00000104030 132 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox9Q04887 Gm15110-201ENSMUST00000117545 881 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Gm11909-201ENSMUST00000121424 759 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Gm25048-201ENSMUST00000158598 91 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox9Q04887 Gm24081-201ENSMUST00000175177 125 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Mir6943-201ENSMUST00000185186 66 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Gm18969-201ENSMUST00000189423 730 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Gm8454-201ENSMUST00000196980 811 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Gm43743-202ENSMUST00000198353 491 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Gm29778-201ENSMUST00000201667 466 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Gm42961-201ENSMUST00000202023 181 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox9Q04887 Gm44432-201ENSMUST00000203342 938 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Gm7587-201ENSMUST00000207618 1021 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sox9Q04887 Gm45405-201ENSMUST00000211544 609 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Gm8106-201ENSMUST00000213123 523 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Gm19137-201ENSMUST00000213790 1164 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Gm19572-201ENSMUST00000214326 338 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Sox9Q04887 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox9Q04887 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sox9Q04887 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox9Q04887 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sox9Q04887 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sox9Q04887 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox9Q04887 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox9Q04887 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox9Q04887 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.28□□□□□ -1.4
Sox9Q04887 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Sox9Q04887 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox9Q04887 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sox9Q04887 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox9Q04887 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox9Q04887 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox9Q04887 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox9Q04887 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox9Q04887 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sox9Q04887 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.27□□□□□ -1.4
Sox9Q04887 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.4
Sox9Q04887 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Sox9Q04887 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox9Q04887 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox9Q04887 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Sox9Q04887 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Sox9Q04887 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox9Q04887 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox9Q04887 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.27□□□□□ -1.41
Sox9Q04887 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Sox9Q04887 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox9Q04887 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox9Q04887 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Sox9Q04887 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Sox9Q04887 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.27□□□□□ -1.41
Sox9Q04887 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox9Q04887 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox9Q04887 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 163 ms