Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.93□□□□□ -1.46
Col2a1P28481 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col2a1P28481 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col2a1P28481 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col2a1P28481 Gm23626-201ENSMUST00000082458 133 ntBASIC5.93□□□□□ -1.46
Col2a1P28481 Gm22220-201ENSMUST00000082671 149 ntBASIC5.93□□□□□ -1.46
Col2a1P28481 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col2a1P28481 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col2a1P28481 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col2a1P28481 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col2a1P28481 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col2a1P28481 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col2a1P28481 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.93□□□□□ -1.46
Col2a1P28481 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.93□□□□□ -1.46
Col2a1P28481 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col2a1P28481 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col2a1P28481 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col2a1P28481 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col2a1P28481 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col2a1P28481 Gm24578-201ENSMUST00000103970 129 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Gm14995-201ENSMUST00000117135 391 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Gm12281-201ENSMUST00000119536 298 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Gm15227-201ENSMUST00000121844 399 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
Col2a1P28481 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.92□□□□□ -1.46
Col2a1P28481 Gm26153-201ENSMUST00000157433 127 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Gm24188-201ENSMUST00000157980 108 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Gm24217-201ENSMUST00000158260 133 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col2a1P28481 Gm5842-201ENSMUST00000195073 622 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Gm37973-201ENSMUST00000195767 1289 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.92□□□□□ -1.46
Col2a1P28481 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.92□□□□□ -1.46
Col2a1P28481 Gm29785-201ENSMUST00000217033 383 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col2a1P28481 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col2a1P28481 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Col2a1P28481 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col2a1P28481 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Col2a1P28481 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Col2a1P28481 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Col2a1P28481 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.92□□□□□ -1.46
Col2a1P28481 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col2a1P28481 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col2a1P28481 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 Gm11790-201ENSMUST00000119569 455 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col2a1P28481 Gm12854-201ENSMUST00000128518 297 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.91□□□□□ -1.46
Col2a1P28481 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.91□□□□□ -1.46
Col2a1P28481 Gm10087-201ENSMUST00000167650 330 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col2a1P28481 V1rg10-201ENSMUST00000183378 937 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 Gm43919-201ENSMUST00000204303 364 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.91□□□□□ -1.46
Col2a1P28481 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 Gm46191-201ENSMUST00000218899 433 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col2a1P28481 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col2a1P28481 Gm7665-201ENSMUST00000076710 297 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col2a1P28481 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col2a1P28481 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col2a1P28481 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
Col2a1P28481 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Col2a1P28481 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Col2a1P28481 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.91□□□□□ -1.46
Col2a1P28481 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.91□□□□□ -1.46
Col2a1P28481 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col2a1P28481 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Col2a1P28481 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col2a1P28481 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col2a1P28481 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col2a1P28481 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col2a1P28481 Gm26376-201ENSMUST00000104784 110 ntBASIC5.9□□□□□ -1.46
Col2a1P28481 Gm11486-201ENSMUST00000107322 478 ntBASIC5.9□□□□□ -1.46
Col2a1P28481 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col2a1P28481 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col2a1P28481 Gm14560-201ENSMUST00000118672 375 ntBASIC5.9□□□□□ -1.46
Col2a1P28481 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.9□□□□□ -1.46
Col2a1P28481 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.9□□□□□ -1.46
Col2a1P28481 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col2a1P28481 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.9□□□□□ -1.46
Col2a1P28481 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.9□□□□□ -1.46
Col2a1P28481 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms