Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.11□□□□□ -1.43
Col1a1P11087 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col1a1P11087 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC6.11□□□□□ -1.43
Col1a1P11087 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col1a1P11087 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col1a1P11087 Gm16571-201ENSMUST00000159112 291 ntBASIC6.11□□□□□ -1.43
Col1a1P11087 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col1a1P11087 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col1a1P11087 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col1a1P11087 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC6.11□□□□□ -1.43
Col1a1P11087 Rab26os-201ENSMUST00000176215 477 ntBASIC6.11□□□□□ -1.43
Col1a1P11087 Mir7074-201ENSMUST00000183884 63 ntBASIC6.11□□□□□ -1.43
Col1a1P11087 Gm27286-201ENSMUST00000184934 179 ntBASIC6.11□□□□□ -1.43
Col1a1P11087 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC6.11□□□□□ -1.43
Col1a1P11087 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC6.11□□□□□ -1.43
Col1a1P11087 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col1a1P11087 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col1a1P11087 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col1a1P11087 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col1a1P11087 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col1a1P11087 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col1a1P11087 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Col1a1P11087 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col1a1P11087 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col1a1P11087 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col1a1P11087 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col1a1P11087 AC153494.1-201ENSMUST00000218664 3041 ntBASIC6.11□□□□□ -1.43
Col1a1P11087 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Col1a1P11087 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC6.11□□□□□ -1.43
Col1a1P11087 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col1a1P11087 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col1a1P11087 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col1a1P11087 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col1a1P11087 Gm37304-201ENSMUST00000193833 2886 ntBASIC6.11□□□□□ -1.43
Col1a1P11087 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col1a1P11087 Gm43528-201ENSMUST00000199492 1674 ntBASIC6.11□□□□□ -1.43
Col1a1P11087 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col1a1P11087 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.11□□□□□ -1.43
Col1a1P11087 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Col1a1P11087 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col1a1P11087 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.1□□□□□ -1.43
Col1a1P11087 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col1a1P11087 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col1a1P11087 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col1a1P11087 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col1a1P11087 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col1a1P11087 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col1a1P11087 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC6.1□□□□□ -1.43
Col1a1P11087 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Col1a1P11087 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col1a1P11087 Gm11447-201ENSMUST00000118983 858 ntBASIC6.1□□□□□ -1.43
Col1a1P11087 Gm15357-201ENSMUST00000119160 285 ntBASIC6.1□□□□□ -1.43
Col1a1P11087 Gm11790-201ENSMUST00000119569 455 ntBASIC6.1□□□□□ -1.43
Col1a1P11087 Gm11369-201ENSMUST00000120812 318 ntBASIC6.1□□□□□ -1.43
Col1a1P11087 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col1a1P11087 Gm17081-201ENSMUST00000167363 478 ntBASIC6.1□□□□□ -1.43
Col1a1P11087 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC6.1□□□□□ -1.43
Col1a1P11087 Gm20056-201ENSMUST00000194813 519 ntBASIC6.1□□□□□ -1.43
Col1a1P11087 Gm19096-201ENSMUST00000209705 766 ntBASIC6.1□□□□□ -1.43
Col1a1P11087 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC6.1□□□□□ -1.43
Col1a1P11087 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col1a1P11087 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col1a1P11087 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Col1a1P11087 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.1□□□□□ -1.43
Col1a1P11087 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col1a1P11087 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col1a1P11087 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col1a1P11087 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col1a1P11087 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC6.1□□□□□ -1.43
Col1a1P11087 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col1a1P11087 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col1a1P11087 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col1a1P11087 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col1a1P11087 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col1a1P11087 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col1a1P11087 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col1a1P11087 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col1a1P11087 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col1a1P11087 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col1a1P11087 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col1a1P11087 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.1□□□□□ -1.43
Col1a1P11087 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col1a1P11087 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Col1a1P11087 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.09□□□□□ -1.43
Col1a1P11087 Gm14995-201ENSMUST00000117135 391 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 Gm12520-201ENSMUST00000117493 316 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 Gm13367-201ENSMUST00000119955 796 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 Gm12110-201ENSMUST00000121601 579 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col1a1P11087 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col1a1P11087 Gm23906-201ENSMUST00000157573 128 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col1a1P11087 Mir3104-201ENSMUST00000174911 63 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Col1a1P11087 Gm6223-201ENSMUST00000178436 871 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col1a1P11087 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC6.09□□□□□ -1.43
Col1a1P11087 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms