Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Gm7142-201ENSMUST00000194232 586 ntBASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Gm4248-201ENSMUST00000196905 316 ntBASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Gm45870-201ENSMUST00000211269 601 ntBASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Gm11790-201ENSMUST00000119569 455 ntBASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Gm11829-201ENSMUST00000121003 282 ntBASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Olfr713-201ENSMUST00000098139 975 ntBASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Gm15058-201ENSMUST00000117689 458 ntBASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Gm4734-201ENSMUST00000200117 777 ntBASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Gm7786-201ENSMUST00000210494 436 ntBASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Gm22739-201ENSMUST00000083437 160 ntBASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col6a3E9PWQ3 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Gm14732-201ENSMUST00000121372 545 ntBASIC5□□□□□ -1.61
Col6a3E9PWQ3 Gm15534-201ENSMUST00000137642 562 ntBASIC5□□□□□ -1.61
Col6a3E9PWQ3 Gm23755-201ENSMUST00000157578 343 ntBASIC5□□□□□ -1.61
Col6a3E9PWQ3 Mir6337-201ENSMUST00000184194 105 ntBASIC5□□□□□ -1.61
Col6a3E9PWQ3 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Mir383-201ENSMUST00000083523 70 ntBASIC5□□□□□ -1.61
Col6a3E9PWQ3 Smcr8-201ENSMUST00000056907 7391 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a3E9PWQ3 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC5□□□□□ -1.61
Col6a3E9PWQ3 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col6a3E9PWQ3 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Gm43084-201ENSMUST00000200696 947 ntBASIC5□□□□□ -1.61
Col6a3E9PWQ3 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC5□□□□□ -1.61
Col6a3E9PWQ3 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Gm24405-201ENSMUST00000083033 167 ntBASIC5□□□□□ -1.61
Col6a3E9PWQ3 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Gm42535-201ENSMUST00000197312 1399 ntBASIC5□□□□□ -1.61
Col6a3E9PWQ3 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5□□□□□ -1.61
Col6a3E9PWQ3 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Gm45767-201ENSMUST00000212778 4561 ntBASIC5□□□□□ -1.61
Col6a3E9PWQ3 Gm29325-201ENSMUST00000190705 2528 ntBASIC5□□□□□ -1.61
Col6a3E9PWQ3 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5□□□□□ -1.61
Col6a3E9PWQ3 Gm26418-201ENSMUST00000104275 137 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm16149-201ENSMUST00000117631 309 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm28195-201ENSMUST00000186992 372 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm4045-201ENSMUST00000204076 310 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm8745-201ENSMUST00000207846 782 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 BC023105-201ENSMUST00000073997 1227 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Synpr-207ENSMUST00000223583 3362 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm37040-201ENSMUST00000191740 1824 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 AC122263.1-201ENSMUST00000228636 2805 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Plekha6-202ENSMUST00000105082 7085 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms