Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Mir466i-201ENSMUST00000116924 121 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm9429-201ENSMUST00000117804 868 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm3931-201ENSMUST00000119038 455 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm14876-201ENSMUST00000120795 327 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm11677-201ENSMUST00000121349 977 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm12005-201ENSMUST00000121451 379 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm12267-201ENSMUST00000121609 761 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdc40Q9DC48 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm23806-201ENSMUST00000175157 109 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm18553-201ENSMUST00000194152 634 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm9332-201ENSMUST00000198431 730 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm43629-201ENSMUST00000201782 704 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm44431-201ENSMUST00000203500 413 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Clec2j-202ENSMUST00000203658 606 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm19921-201ENSMUST00000210505 703 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm40692-201ENSMUST00000220411 491 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Thoc7-209ENSMUST00000225325 765 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 AC154452.1-201ENSMUST00000225819 241 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 AC154806.4-201ENSMUST00000227406 439 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 AC164295.2-201ENSMUST00000228539 757 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cdc40Q9DC48 n-R5s173-201ENSMUST00000082620 119 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm22807-201ENSMUST00000082737 129 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Cdc40Q9DC48 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cdc40Q9DC48 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm8989-201ENSMUST00000184782 7275 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Cdc40Q9DC48 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm43164-201ENSMUST00000202529 2128 ntBASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm13579-201ENSMUST00000118519 517 ntBASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm14769-201ENSMUST00000118590 432 ntBASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm24239-201ENSMUST00000157791 255 ntBASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm28186-201ENSMUST00000187447 679 ntBASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm29454-201ENSMUST00000190805 393 ntBASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm18036-201ENSMUST00000195256 272 ntBASIC4.99□□□□□ -1.61
Cdc40Q9DC48 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm23459-201ENSMUST00000083259 131 ntBASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm7676-201ENSMUST00000084055 319 ntBASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm38189-201ENSMUST00000194495 1457 ntBASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm37060-201ENSMUST00000194997 2397 ntBASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm37051-201ENSMUST00000194535 2943 ntBASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Gm42492-201ENSMUST00000195780 2915 ntBASIC4.99□□□□□ -1.61
Cdc40Q9DC48 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Cdc40Q9DC48 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cdc40Q9DC48 AC136019.1-201ENSMUST00000226503 1412 ntBASIC4.98□□□□□ -1.61
Cdc40Q9DC48 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Cdc40Q9DC48 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.98□□□□□ -1.61
Cdc40Q9DC48 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cdc40Q9DC48 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms