Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Gm43367-201ENSMUST00000199986 625 ntBASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC7.72□□□□□ -1.17
Usp40Q8BWR4 AC126275.1-201ENSMUST00000224881 446 ntBASIC7.72□□□□□ -1.17
Usp40Q8BWR4 AC168880.1-201ENSMUST00000225113 707 ntBASIC7.72□□□□□ -1.17
Usp40Q8BWR4 CT009550.5-201ENSMUST00000226286 382 ntBASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Clec2j-201ENSMUST00000032517 515 ntBASIC7.72□□□□□ -1.17
Usp40Q8BWR4 BC023105-201ENSMUST00000073997 1227 ntBASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 AC121960.2-201ENSMUST00000227349 3446 ntBASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Usp40Q8BWR4 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Usp40Q8BWR4 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Usp40Q8BWR4 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Usp40Q8BWR4 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Usp40Q8BWR4 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.17
Usp40Q8BWR4 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Usp40Q8BWR4 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Usp40Q8BWR4 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm24374-201ENSMUST00000104394 106 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm6382-201ENSMUST00000118873 942 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm12808-201ENSMUST00000120597 404 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm25291-201ENSMUST00000122795 144 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm22038-201ENSMUST00000157277 242 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm25430-201ENSMUST00000157614 289 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm23819-201ENSMUST00000158744 109 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm27193-201ENSMUST00000184217 586 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm37336-202ENSMUST00000193705 468 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm18553-201ENSMUST00000194152 634 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm18215-201ENSMUST00000204429 798 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm44232-201ENSMUST00000204537 225 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm17992-201ENSMUST00000207346 1072 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 AC154636.3-201ENSMUST00000221489 1214 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 AC154724.1-201ENSMUST00000225782 821 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm9386-201ENSMUST00000095195 381 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm44235-201ENSMUST00000204312 3058 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm14857-201ENSMUST00000117862 3185 ntBASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Usp40Q8BWR4 Gm43857-201ENSMUST00000200343 3079 ntBASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Gm14445-201ENSMUST00000117051 1484 ntBASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Gm14175-201ENSMUST00000119835 241 ntBASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Gm11677-201ENSMUST00000121349 977 ntBASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Gm24860-201ENSMUST00000158457 276 ntBASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC7.7□□□□□ -1.18
Usp40Q8BWR4 AL603630.1-201ENSMUST00000214781 147 ntBASIC7.7□□□□□ -1.18
Usp40Q8BWR4 Platr25-208ENSMUST00000222602 939 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms