Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Pcdh19Q80TF3 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm22019-201ENSMUST00000104359 96 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm13265-201ENSMUST00000118090 421 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm12230-201ENSMUST00000118301 454 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm14506-201ENSMUST00000121165 536 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm14766-201ENSMUST00000121689 367 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm4997-201ENSMUST00000154056 360 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm23031-201ENSMUST00000157998 119 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm22428-201ENSMUST00000158554 132 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm6808-201ENSMUST00000162341 807 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm20530-201ENSMUST00000174261 254 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm18447-201ENSMUST00000187501 307 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm28625-201ENSMUST00000188309 205 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm37189-201ENSMUST00000192131 298 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm44048-201ENSMUST00000204531 361 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm5917-201ENSMUST00000217638 721 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm18557-201ENSMUST00000218710 433 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 AC137871.2-201ENSMUST00000226482 289 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms