Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 AC140930.4-201ENSMUST00000220750 150 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 AC170810.3-201ENSMUST00000226177 374 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 AC166344.2-201ENSMUST00000226747 374 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 AC131178.1-201ENSMUST00000228649 492 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.54
Trim41Q5NCC3 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim41Q5NCC3 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim41Q5NCC3 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trim41Q5NCC3 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trim41Q5NCC3 Gm38081-201ENSMUST00000192680 1645 ntBASIC11.71□□□□□ -0.54
Trim41Q5NCC3 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim41Q5NCC3 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trim41Q5NCC3 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm37790-201ENSMUST00000193136 3346 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm25345-201ENSMUST00000104505 133 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm14733-201ENSMUST00000117680 133 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm11625-201ENSMUST00000119535 296 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm14521-201ENSMUST00000119545 350 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm14614-201ENSMUST00000119873 384 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm9587-201ENSMUST00000172449 454 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm25244-201ENSMUST00000178089 132 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm8192-201ENSMUST00000182196 958 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm33354-201ENSMUST00000195448 906 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm42465-201ENSMUST00000197036 492 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm3266-201ENSMUST00000217832 591 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 CR974485.1-201ENSMUST00000222408 402 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 CT030645.2-201ENSMUST00000224321 1012 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 AC154583.1-201ENSMUST00000224788 655 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm26130-201ENSMUST00000083171 138 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC11.7□□□□□ -0.54
Trim41Q5NCC3 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim41Q5NCC3 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm22371-201ENSMUST00000104588 130 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm24444-201ENSMUST00000157244 308 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm25550-201ENSMUST00000158079 128 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm22076-201ENSMUST00000158601 84 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm3053-201ENSMUST00000161709 616 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm19932-201ENSMUST00000177033 313 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm28629-201ENSMUST00000187309 263 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm37375-201ENSMUST00000193859 387 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm37385-201ENSMUST00000195223 387 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm43798-201ENSMUST00000202056 394 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm45508-201ENSMUST00000209298 299 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 AC131795.1-201ENSMUST00000219632 426 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm8613-201ENSMUST00000220383 1077 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 AC140930.1-201ENSMUST00000221889 389 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm36262-201ENSMUST00000223274 499 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 AC113031.1-201ENSMUST00000227400 432 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 n-R5s97-201ENSMUST00000082585 113 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Mir181a-2-201ENSMUST00000083489 76 ntBASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms