Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Usp39Q3TIX9 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Usp39Q3TIX9 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.75□□□□□ -1.49
Usp39Q3TIX9 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.75□□□□□ -1.49
Usp39Q3TIX9 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Usp39Q3TIX9 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC5.75□□□□□ -1.49
Usp39Q3TIX9 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Usp39Q3TIX9 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Usp39Q3TIX9 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm22952-201ENSMUST00000116720 120 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm8501-201ENSMUST00000117684 432 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm4914-201ENSMUST00000119757 459 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm11357-201ENSMUST00000119758 954 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm11404-201ENSMUST00000120872 494 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm12288-201ENSMUST00000121054 1282 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm13024-201ENSMUST00000121756 718 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm14122-201ENSMUST00000122076 973 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm15840-201ENSMUST00000122099 943 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm23111-201ENSMUST00000122652 105 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Snora47-201ENSMUST00000157483 138 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm23082-201ENSMUST00000157852 133 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm23995-201ENSMUST00000158060 129 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm24393-201ENSMUST00000158135 97 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm26169-201ENSMUST00000158420 135 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm24773-201ENSMUST00000158513 99 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Mir6361-201ENSMUST00000185079 101 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm28080-201ENSMUST00000188552 722 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm21524-201ENSMUST00000190499 696 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm21715-201ENSMUST00000191056 694 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm7733-201ENSMUST00000199038 919 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm4859-201ENSMUST00000199625 787 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm43501-201ENSMUST00000202513 107 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Usp39Q3TIX9 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm23739-201ENSMUST00000102295 108 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm25917-201ENSMUST00000104267 130 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm13114-201ENSMUST00000117605 106 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm13806-201ENSMUST00000117822 325 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm7927-201ENSMUST00000118818 880 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm11910-201ENSMUST00000121624 432 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm9428-201ENSMUST00000127214 769 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm22186-201ENSMUST00000157822 122 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Mir1945-201ENSMUST00000157919 78 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms