Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sox3P53784 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox3P53784 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sox3P53784 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.18□□□□□ -1.58
Sox3P53784 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox3P53784 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Sox3P53784 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox3P53784 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Sox3P53784 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sox3P53784 Gm24117-201ENSMUST00000103973 133 ntBASIC5.18□□□□□ -1.58
Sox3P53784 Gm24469-201ENSMUST00000104487 131 ntBASIC5.18□□□□□ -1.58
Sox3P53784 Gm23879-201ENSMUST00000116874 126 ntBASIC5.18□□□□□ -1.58
Sox3P53784 Gm11366-201ENSMUST00000119279 429 ntBASIC5.18□□□□□ -1.58
Sox3P53784 Gm17223-201ENSMUST00000171413 481 ntBASIC5.18□□□□□ -1.58
Sox3P53784 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox3P53784 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox3P53784 Gm28196-201ENSMUST00000187719 640 ntBASIC5.18□□□□□ -1.58
Sox3P53784 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.18□□□□□ -1.58
Sox3P53784 Gm44253-201ENSMUST00000203387 628 ntBASIC5.18□□□□□ -1.58
Sox3P53784 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.18□□□□□ -1.58
Sox3P53784 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox3P53784 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.18□□□□□ -1.58
Sox3P53784 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.18□□□□□ -1.58
Sox3P53784 AC125190.2-201ENSMUST00000221160 497 ntBASIC5.18□□□□□ -1.58
Sox3P53784 Gm32526-201ENSMUST00000221878 981 ntBASIC5.18□□□□□ -1.58
Sox3P53784 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.18□□□□□ -1.58
Sox3P53784 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.18□□□□□ -1.58
Sox3P53784 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.18□□□□□ -1.58
Sox3P53784 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox3P53784 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox3P53784 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Sox3P53784 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox3P53784 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.18□□□□□ -1.58
Sox3P53784 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox3P53784 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.18□□□□□ -1.58
Sox3P53784 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox3P53784 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.18□□□□□ -1.58
Sox3P53784 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox3P53784 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox3P53784 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox3P53784 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox3P53784 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox3P53784 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.17□□□□□ -1.58
Sox3P53784 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox3P53784 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox3P53784 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox3P53784 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox3P53784 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sox3P53784 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.17□□□□□ -1.58
Sox3P53784 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Sox3P53784 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox3P53784 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Sox3P53784 Gm12850-201ENSMUST00000119210 436 ntBASIC5.17□□□□□ -1.58
Sox3P53784 Gm15971-201ENSMUST00000119372 211 ntBASIC5.17□□□□□ -1.58
Sox3P53784 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.17□□□□□ -1.58
Sox3P53784 Gm11369-201ENSMUST00000120812 318 ntBASIC5.17□□□□□ -1.58
Sox3P53784 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.17□□□□□ -1.58
Sox3P53784 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.17□□□□□ -1.58
Sox3P53784 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.17□□□□□ -1.58
Sox3P53784 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox3P53784 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox3P53784 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.17□□□□□ -1.58
Sox3P53784 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.17□□□□□ -1.58
Sox3P53784 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.17□□□□□ -1.58
Sox3P53784 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.17□□□□□ -1.58
Sox3P53784 Gm4290-201ENSMUST00000206897 814 ntBASIC5.17□□□□□ -1.58
Sox3P53784 Gm3257-201ENSMUST00000207217 675 ntBASIC5.17□□□□□ -1.58
Sox3P53784 Gm18127-201ENSMUST00000208479 725 ntBASIC5.17□□□□□ -1.58
Sox3P53784 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.17□□□□□ -1.58
Sox3P53784 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.17□□□□□ -1.58
Sox3P53784 Gm8523-201ENSMUST00000211386 552 ntBASIC5.17□□□□□ -1.58
Sox3P53784 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.17□□□□□ -1.58
Sox3P53784 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC5.17□□□□□ -1.58
Sox3P53784 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.17□□□□□ -1.58
Sox3P53784 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.17□□□□□ -1.58
Sox3P53784 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox3P53784 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox3P53784 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox3P53784 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.17□□□□□ -1.58
Sox3P53784 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox3P53784 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms