Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col18a1P39061 Gm45819-201ENSMUST00000210940 1751 ntBASIC7.4□□□□□ -1.22
Col18a1P39061 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col18a1P39061 Gm44527-202ENSMUST00000204519 1314 ntBASIC7.4□□□□□ -1.22
Col18a1P39061 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC7.4□□□□□ -1.22
Col18a1P39061 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
Col18a1P39061 AC153729.1-201ENSMUST00000214055 2562 ntBASIC7.4□□□□□ -1.22
Col18a1P39061 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC7.4□□□□□ -1.22
Col18a1P39061 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col18a1P39061 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col18a1P39061 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col18a1P39061 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col18a1P39061 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC7.4□□□□□ -1.22
Col18a1P39061 Gm15916-201ENSMUST00000118355 736 ntBASIC7.4□□□□□ -1.23
Col18a1P39061 Gm12422-201ENSMUST00000121431 302 ntBASIC7.4□□□□□ -1.23
Col18a1P39061 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC7.4□□□□□ -1.23
Col18a1P39061 Gm23171-201ENSMUST00000157159 264 ntBASIC7.4□□□□□ -1.23
Col18a1P39061 Gm25278-201ENSMUST00000157267 120 ntBASIC7.4□□□□□ -1.23
Col18a1P39061 Gm23279-201ENSMUST00000157912 97 ntBASIC7.4□□□□□ -1.23
Col18a1P39061 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC7.4□□□□□ -1.23
Col18a1P39061 Gm27148-201ENSMUST00000185086 160 ntBASIC7.4□□□□□ -1.23
Col18a1P39061 Gm20776-201ENSMUST00000189940 700 ntBASIC7.4□□□□□ -1.23
Col18a1P39061 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC7.4□□□□□ -1.23
Col18a1P39061 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC7.4□□□□□ -1.23
Col18a1P39061 Gm42461-201ENSMUST00000198627 1150 ntBASIC7.4□□□□□ -1.23
Col18a1P39061 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC7.4□□□□□ -1.23
Col18a1P39061 Gm45912-201ENSMUST00000210646 543 ntBASIC7.4□□□□□ -1.23
Col18a1P39061 AC158523.2-201ENSMUST00000222708 548 ntBASIC7.4□□□□□ -1.23
Col18a1P39061 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.23
Col18a1P39061 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
Col18a1P39061 Gm22977-201ENSMUST00000082615 107 ntBASIC7.4□□□□□ -1.23
Col18a1P39061 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col18a1P39061 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col18a1P39061 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC7.4□□□□□ -1.23
Col18a1P39061 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
Col18a1P39061 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC7.39□□□□□ -1.23
Col18a1P39061 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col18a1P39061 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col18a1P39061 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col18a1P39061 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col18a1P39061 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col18a1P39061 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col18a1P39061 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col18a1P39061 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC7.39□□□□□ -1.23
Col18a1P39061 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC7.39□□□□□ -1.23
Col18a1P39061 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col18a1P39061 Gm25665-201ENSMUST00000157695 110 ntBASIC7.39□□□□□ -1.23
Col18a1P39061 Gm16558-201ENSMUST00000163015 532 ntBASIC7.39□□□□□ -1.23
Col18a1P39061 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC7.39□□□□□ -1.23
Col18a1P39061 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
Col18a1P39061 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col18a1P39061 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC7.39□□□□□ -1.23
Col18a1P39061 Gm26925-201ENSMUST00000182470 957 ntBASIC7.39□□□□□ -1.23
Col18a1P39061 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC7.39□□□□□ -1.23
Col18a1P39061 Gm2367-201ENSMUST00000192374 472 ntBASIC7.39□□□□□ -1.23
Col18a1P39061 Gm17994-201ENSMUST00000209260 533 ntBASIC7.39□□□□□ -1.23
Col18a1P39061 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC7.39□□□□□ -1.23
Col18a1P39061 Mir350-201ENSMUST00000083639 99 ntBASIC7.39□□□□□ -1.23
Col18a1P39061 Gm22864-201ENSMUST00000083950 130 ntBASIC7.39□□□□□ -1.23
Col18a1P39061 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col18a1P39061 AC154755.2-201ENSMUST00000224384 2857 ntBASIC7.39□□□□□ -1.23
Col18a1P39061 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col18a1P39061 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col18a1P39061 Gm14797-201ENSMUST00000119378 1480 ntBASIC7.39□□□□□ -1.23
Col18a1P39061 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Col18a1P39061 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col18a1P39061 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
Col18a1P39061 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Col18a1P39061 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Col18a1P39061 Gm37086-201ENSMUST00000193082 3452 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Gm23193-201ENSMUST00000102427 82 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC7.38□□□□□ -1.23
Col18a1P39061 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC7.38□□□□□ -1.23
Col18a1P39061 Gm25096-201ENSMUST00000104043 129 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC7.38□□□□□ -1.23
Col18a1P39061 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Col18a1P39061 Gm19898-201ENSMUST00000177490 251 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Gm29588-201ENSMUST00000185738 298 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Gm38046-201ENSMUST00000192733 550 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Gm43245-201ENSMUST00000197603 468 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Gm44757-201ENSMUST00000206373 157 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC7.38□□□□□ -1.23
Col18a1P39061 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col18a1P39061 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Col18a1P39061 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Col18a1P39061 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Col18a1P39061 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Col18a1P39061 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Col18a1P39061 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
Col18a1P39061 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Col18a1P39061 Gm37106-201ENSMUST00000193760 1532 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col18a1P39061 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Col18a1P39061 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col18a1P39061 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC7.38□□□□□ -1.23
Col18a1P39061 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC7.38□□□□□ -1.23
Col18a1P39061 Gm16250-201ENSMUST00000148974 256 ntBASIC7.38□□□□□ -1.23
Col18a1P39061 Gm22730-201ENSMUST00000158085 171 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms