Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col2a1P28481 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col2a1P28481 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Col2a1P28481 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Col2a1P28481 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.95□□□□□ -1.46
Col2a1P28481 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col2a1P28481 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col2a1P28481 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col2a1P28481 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Col2a1P28481 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col2a1P28481 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col2a1P28481 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col2a1P28481 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.95□□□□□ -1.46
Col2a1P28481 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col2a1P28481 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col2a1P28481 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col2a1P28481 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 Gm22488-201ENSMUST00000116811 127 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 Gm16254-201ENSMUST00000131528 730 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.95□□□□□ -1.46
Col2a1P28481 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 Gm6632-201ENSMUST00000168425 954 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 Gm25942-201ENSMUST00000180080 110 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 Mir6416-201ENSMUST00000183664 117 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 Gm45608-201ENSMUST00000210948 389 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.95□□□□□ -1.46
Col2a1P28481 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Col2a1P28481 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.95□□□□□ -1.46
Col2a1P28481 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col2a1P28481 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.95□□□□□ -1.46
Col2a1P28481 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col2a1P28481 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col2a1P28481 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col2a1P28481 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col2a1P28481 Gm44723-201ENSMUST00000207369 4000 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col2a1P28481 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col2a1P28481 Gm25419-201ENSMUST00000104215 191 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Gm16128-201ENSMUST00000117855 626 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Gm12423-201ENSMUST00000118334 135 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Gm11366-201ENSMUST00000119279 429 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Gm15390-201ENSMUST00000120323 738 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col2a1P28481 Gm3531-201ENSMUST00000162698 489 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col2a1P28481 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Gm5777-201ENSMUST00000177265 448 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col2a1P28481 Gm28567-201ENSMUST00000190270 693 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Gm37044-201ENSMUST00000193531 693 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Gm38369-201ENSMUST00000195101 693 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Gm18537-201ENSMUST00000205709 989 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.94□□□□□ -1.46
Col2a1P28481 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col2a1P28481 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col2a1P28481 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
Col2a1P28481 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.94□□□□□ -1.46
Col2a1P28481 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col2a1P28481 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.94□□□□□ -1.46
Col2a1P28481 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.93□□□□□ -1.46
Col2a1P28481 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col2a1P28481 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.93□□□□□ -1.46
Col2a1P28481 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col2a1P28481 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col2a1P28481 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col2a1P28481 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col2a1P28481 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.93□□□□□ -1.46
Col2a1P28481 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.93□□□□□ -1.46
Col2a1P28481 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col2a1P28481 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col2a1P28481 Gm25655-201ENSMUST00000158465 290 ntBASIC5.93□□□□□ -1.46
Col2a1P28481 Gm25907-201ENSMUST00000158486 125 ntBASIC5.93□□□□□ -1.46
Col2a1P28481 Gm20940-201ENSMUST00000197308 360 ntBASIC5.93□□□□□ -1.46
Col2a1P28481 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.93□□□□□ -1.46
Col2a1P28481 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms