Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC6.28□□□□□ -1.4
Col4a1P02463 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a1P02463 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col4a1P02463 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a1P02463 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.27□□□□□ -1.41
Col4a1P02463 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col4a1P02463 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC6.27□□□□□ -1.41
Col4a1P02463 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col4a1P02463 Gm45129-201ENSMUST00000208444 2224 ntBASIC6.27□□□□□ -1.41
Col4a1P02463 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC6.27□□□□□ -1.41
Col4a1P02463 Gm23193-201ENSMUST00000102427 82 ntBASIC6.27□□□□□ -1.41
Col4a1P02463 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC6.27□□□□□ -1.41
Col4a1P02463 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col4a1P02463 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Col4a1P02463 Gm27820-201ENSMUST00000183628 175 ntBASIC6.27□□□□□ -1.41
Col4a1P02463 Gm20954-201ENSMUST00000189078 644 ntBASIC6.27□□□□□ -1.41
Col4a1P02463 Gm2622-201ENSMUST00000200018 471 ntBASIC6.27□□□□□ -1.41
Col4a1P02463 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.27□□□□□ -1.41
Col4a1P02463 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC6.27□□□□□ -1.41
Col4a1P02463 CT030242.3-201ENSMUST00000221231 581 ntBASIC6.27□□□□□ -1.41
Col4a1P02463 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.27□□□□□ -1.41
Col4a1P02463 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col4a1P02463 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.27□□□□□ -1.41
Col4a1P02463 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col4a1P02463 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 AW046200-203ENSMUST00000211787 2479 ntBASIC6.27□□□□□ -1.41
Col4a1P02463 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.27□□□□□ -1.41
Col4a1P02463 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 AC154257.1-201ENSMUST00000224811 1525 ntBASIC6.27□□□□□ -1.41
Col4a1P02463 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col4a1P02463 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col4a1P02463 Gm14046-201ENSMUST00000119389 509 ntBASIC6.26□□□□□ -1.41
Col4a1P02463 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC6.26□□□□□ -1.41
Col4a1P02463 Gm16571-201ENSMUST00000159112 291 ntBASIC6.26□□□□□ -1.41
Col4a1P02463 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.26□□□□□ -1.41
Col4a1P02463 Trbv9-201ENSMUST00000194494 290 ntBASIC6.26□□□□□ -1.41
Col4a1P02463 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC6.26□□□□□ -1.41
Col4a1P02463 Gm8719-201ENSMUST00000203602 534 ntBASIC6.26□□□□□ -1.41
Col4a1P02463 Gm45236-201ENSMUST00000208632 229 ntBASIC6.26□□□□□ -1.41
Col4a1P02463 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a1P02463 AC131329.1-201ENSMUST00000221204 3487 ntBASIC6.26□□□□□ -1.41
Col4a1P02463 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col4a1P02463 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a1P02463 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Col4a1P02463 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a1P02463 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC6.26□□□□□ -1.41
Col4a1P02463 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a1P02463 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Col4a1P02463 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a1P02463 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a1P02463 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.26□□□□□ -1.41
Col4a1P02463 Gm44668-201ENSMUST00000207911 3265 ntBASIC6.26□□□□□ -1.41
Col4a1P02463 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a1P02463 Gm24124-201ENSMUST00000104103 132 ntBASIC6.26□□□□□ -1.41
Col4a1P02463 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC6.26□□□□□ -1.41
Col4a1P02463 Gm11914-201ENSMUST00000117094 507 ntBASIC6.26□□□□□ -1.41
Col4a1P02463 Gm12520-201ENSMUST00000117493 316 ntBASIC6.26□□□□□ -1.41
Col4a1P02463 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col4a1P02463 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a1P02463 Gm23023-201ENSMUST00000158767 109 ntBASIC6.26□□□□□ -1.41
Col4a1P02463 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col4a1P02463 Gm44757-201ENSMUST00000206373 157 ntBASIC6.26□□□□□ -1.41
Col4a1P02463 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC6.26□□□□□ -1.41
Col4a1P02463 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col4a1P02463 Desi2-202ENSMUST00000069568 1193 ntBASIC6.26□□□□□ -1.41
Col4a1P02463 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a1P02463 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a1P02463 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col4a1P02463 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col4a1P02463 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.26□□□□□ -1.41
Col4a1P02463 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a1P02463 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a1P02463 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a1P02463 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a1P02463 Gm24125-201ENSMUST00000104105 137 ntBASIC6.25□□□□□ -1.41
Col4a1P02463 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a1P02463 Gm4852-201ENSMUST00000121202 729 ntBASIC6.25□□□□□ -1.41
Col4a1P02463 n-R5s21-201ENSMUST00000122692 117 ntBASIC6.25□□□□□ -1.41
Col4a1P02463 Gm16250-201ENSMUST00000148974 256 ntBASIC6.25□□□□□ -1.41
Col4a1P02463 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a1P02463 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC6.25□□□□□ -1.41
Col4a1P02463 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.25□□□□□ -1.41
Col4a1P02463 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.25□□□□□ -1.41
Col4a1P02463 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC6.25□□□□□ -1.41
Col4a1P02463 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col4a1P02463 Gm16456-201ENSMUST00000174431 920 ntBASIC6.25□□□□□ -1.41
Col4a1P02463 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms