Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm43281-201ENSMUST00000202522 2704 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm12328-201ENSMUST00000118611 197 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm26153-201ENSMUST00000157433 127 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm6047-201ENSMUST00000167221 574 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm9687-201ENSMUST00000189312 602 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 AC154305.3-201ENSMUST00000224661 552 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm25147-201ENSMUST00000083030 105 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 AC124183.1-201ENSMUST00000222367 2135 ntBASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Gm29084-201ENSMUST00000185587 1452 ntBASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Gm24685-201ENSMUST00000157764 285 ntBASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Gm43237-201ENSMUST00000196835 1044 ntBASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccdc180J3QNE4 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Gm43567-201ENSMUST00000197581 1978 ntBASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Gm44695-201ENSMUST00000205567 1631 ntBASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Gm7840-201ENSMUST00000122086 533 ntBASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Gm25103-201ENSMUST00000122671 318 ntBASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Gm2622-201ENSMUST00000200018 471 ntBASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Snord15b-201ENSMUST00000083032 145 ntBASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 AC170999.1-201ENSMUST00000226359 1585 ntBASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Gm43025-201ENSMUST00000201764 1886 ntBASIC9.59□□□□□ -0.87
Ccdc180J3QNE4 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Gm18537-201ENSMUST00000205709 989 ntBASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Gm37940-201ENSMUST00000194243 3251 ntBASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 AC130827.1-201ENSMUST00000220476 3850 ntBASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccdc180J3QNE4 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms