Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Zbtb34-201ENSMUST00000091037 6510 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm13195-201ENSMUST00000117229 261 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm3160-201ENSMUST00000128343 607 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm37164-201ENSMUST00000192809 637 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm5548-201ENSMUST00000055878 397 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm26367-201ENSMUST00000104165 132 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm27193-201ENSMUST00000184217 586 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm2497-201ENSMUST00000189539 601 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm44583-201ENSMUST00000207478 281 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Adgrl2-217ENSMUST00000200154 5412 ntTSL 5 BASIC5.03□□□□□ -1.61
Col6a3E9PWQ3 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm14383-201ENSMUST00000121637 386 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm27037-201ENSMUST00000182270 960 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm37716-201ENSMUST00000193553 947 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm26379-202ENSMUST00000200225 132 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm45007-201ENSMUST00000206237 366 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 AC165106.1-201ENSMUST00000227580 408 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm12465-201ENSMUST00000118591 300 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm15840-201ENSMUST00000122099 943 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm37104-201ENSMUST00000193278 196 ntBASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a3E9PWQ3 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms