Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Upk3aQ9JKX8 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upk3aQ9JKX8 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upk3aQ9JKX8 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Upk3aQ9JKX8 Smc5-206ENSMUST00000226111 3265 ntBASIC5.12□□□□□ -1.59
Upk3aQ9JKX8 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Gm12007-201ENSMUST00000120978 597 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Gm12005-201ENSMUST00000121451 379 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Gm23354-201ENSMUST00000158426 104 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Gm37882-201ENSMUST00000195254 196 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Gm44683-201ENSMUST00000209088 484 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Mir20a-201ENSMUST00000083508 107 ntBASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upk3aQ9JKX8 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm4853-201ENSMUST00000119359 394 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm12422-201ENSMUST00000121431 302 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm23069-201ENSMUST00000158240 311 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm2959-201ENSMUST00000169844 621 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm22420-201ENSMUST00000178795 126 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Mir7037-201ENSMUST00000184414 65 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Mir7687-201ENSMUST00000184722 59 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm33952-201ENSMUST00000197795 408 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm44281-201ENSMUST00000203090 166 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm44221-201ENSMUST00000203552 388 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm8719-201ENSMUST00000203602 534 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm44307-201ENSMUST00000204466 764 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.1□□□□□ -1.59
Upk3aQ9JKX8 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms