Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Syne4Q8CII8 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.34□□□□□ -1.39
Syne4Q8CII8 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Syne4Q8CII8 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Syne4Q8CII8 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.34□□□□□ -1.4
Syne4Q8CII8 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.34□□□□□ -1.4
Syne4Q8CII8 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Syne4Q8CII8 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.34□□□□□ -1.4
Syne4Q8CII8 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.34□□□□□ -1.4
Syne4Q8CII8 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Syne4Q8CII8 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.34□□□□□ -1.4
Syne4Q8CII8 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.34□□□□□ -1.4
Syne4Q8CII8 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Syne4Q8CII8 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm44897-201ENSMUST00000206187 1341 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm13435-201ENSMUST00000120111 1023 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm13808-201ENSMUST00000121353 184 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm28567-201ENSMUST00000190270 693 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm29072-201ENSMUST00000191149 678 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm34176-201ENSMUST00000192621 474 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm37044-201ENSMUST00000193531 693 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm38369-201ENSMUST00000195101 693 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Igkv12-47-201ENSMUST00000196961 356 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne4Q8CII8 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm45008-201ENSMUST00000206420 493 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm6070-201ENSMUST00000207275 419 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm4574-201ENSMUST00000207804 542 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm18127-201ENSMUST00000208479 725 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm7333-201ENSMUST00000213449 1060 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm4928-201ENSMUST00000219622 850 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 AC158631.2-201ENSMUST00000219999 478 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Platr25-208ENSMUST00000222602 939 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm19154-201ENSMUST00000223330 940 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 AC174797.4-201ENSMUST00000225510 347 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 AC098742.1-201ENSMUST00000227945 373 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Syne4Q8CII8 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Syne4Q8CII8 Gm8979-201ENSMUST00000183386 7296 ntBASIC6.33□□□□□ -1.4
Syne4Q8CII8 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.32□□□□□ -1.4
Syne4Q8CII8 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.32□□□□□ -1.4
Syne4Q8CII8 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.32□□□□□ -1.4
Syne4Q8CII8 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Gm14610-201ENSMUST00000118358 966 ntBASIC6.32□□□□□ -1.4
Syne4Q8CII8 Gm15120-201ENSMUST00000120602 301 ntBASIC6.32□□□□□ -1.4
Syne4Q8CII8 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC6.32□□□□□ -1.4
Syne4Q8CII8 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Gm15812-201ENSMUST00000162331 748 ntBASIC6.32□□□□□ -1.4
Syne4Q8CII8 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC6.32□□□□□ -1.4
Syne4Q8CII8 Gm9457-201ENSMUST00000180176 372 ntBASIC6.32□□□□□ -1.4
Syne4Q8CII8 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Syne4Q8CII8 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Gm37716-201ENSMUST00000193553 947 ntBASIC6.32□□□□□ -1.4
Syne4Q8CII8 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Gm29736-201ENSMUST00000198189 385 ntBASIC6.32□□□□□ -1.4
Syne4Q8CII8 Gm43768-201ENSMUST00000198380 1258 ntBASIC6.32□□□□□ -1.4
Syne4Q8CII8 Gm44281-201ENSMUST00000203090 166 ntBASIC6.32□□□□□ -1.4
Syne4Q8CII8 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC6.32□□□□□ -1.4
Syne4Q8CII8 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC6.32□□□□□ -1.4
Syne4Q8CII8 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.32□□□□□ -1.4
Syne4Q8CII8 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Syne4Q8CII8 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms