Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 AC122024.1-201ENSMUST00000219276 4850 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm42508-201ENSMUST00000199972 3292 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm14995-201ENSMUST00000117135 391 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm22789-201ENSMUST00000157884 130 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm26085-201ENSMUST00000157900 116 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm23945-201ENSMUST00000179609 92 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm44074-201ENSMUST00000204562 337 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm6906-201ENSMUST00000218014 569 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm24763-201ENSMUST00000083688 190 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm45838-201ENSMUST00000207355 2447 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm45493-201ENSMUST00000209494 3948 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm37913-201ENSMUST00000192925 2544 ntBASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 Gm18163-201ENSMUST00000197877 1643 ntBASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 Gm8145-201ENSMUST00000118220 745 ntBASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 Zakit-201ENSMUST00000157677 308 ntBASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 Gm28097-201ENSMUST00000187333 366 ntBASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 Gm37503-201ENSMUST00000192088 319 ntBASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 AC160031.1-201ENSMUST00000219914 522 ntBASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Col6a6Q8C6K9 Gm44242-201ENSMUST00000204212 2721 ntBASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Gm28320-201ENSMUST00000187777 2273 ntBASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 AC151971.5-201ENSMUST00000214422 3254 ntBASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 AC164567.3-201ENSMUST00000217743 2869 ntBASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Gm37435-201ENSMUST00000192078 3947 ntBASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Gm44441-201ENSMUST00000203642 2475 ntBASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 AC122355.1-201ENSMUST00000228155 4184 ntBASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Gm12237-201ENSMUST00000120158 470 ntBASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Gm20056-201ENSMUST00000194813 519 ntBASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Gm44108-201ENSMUST00000203525 422 ntBASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a6Q8C6K9 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 AC162467.3-201ENSMUST00000219716 2172 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm44801-201ENSMUST00000207644 2060 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm42662-201ENSMUST00000202539 1431 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm15297-201ENSMUST00000117795 290 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm6647-201ENSMUST00000170514 641 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms