Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm29525-201ENSMUST00000189844 699 ntBASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Gm29523-201ENSMUST00000191415 699 ntBASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Gm6321-201ENSMUST00000194460 1090 ntBASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Gm8891-201ENSMUST00000198546 832 ntBASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Gm42646-201ENSMUST00000202233 914 ntBASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 AC154484.1-201ENSMUST00000227311 771 ntBASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Gm7887-201ENSMUST00000056948 537 ntBASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Gm25131-201ENSMUST00000082653 151 ntBASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 AC149294.7-201ENSMUST00000227475 1432 ntBASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sp140Q6NSQ5 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm19210-201ENSMUST00000199562 1350 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm23294-201ENSMUST00000104150 164 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm11902-201ENSMUST00000118849 270 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm15781-201ENSMUST00000120216 323 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm11882-201ENSMUST00000121463 506 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm23896-201ENSMUST00000158109 130 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm23149-201ENSMUST00000158837 230 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Mir6952-201ENSMUST00000185092 61 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm37191-201ENSMUST00000193346 388 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm44559-201ENSMUST00000207177 1012 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm18268-201ENSMUST00000208445 943 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm18205-201ENSMUST00000209215 841 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm46103-201ENSMUST00000217614 341 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 AC133654.1-201ENSMUST00000228411 672 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Gm10704-201ENSMUST00000098952 730 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sp140Q6NSQ5 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sp140Q6NSQ5 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sp140Q6NSQ5 AC154552.6-201ENSMUST00000221365 1342 ntBASIC5.8□□□□□ -1.48
Sp140Q6NSQ5 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sp140Q6NSQ5 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sp140Q6NSQ5 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sp140Q6NSQ5 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms