Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 AC126043.1-201ENSMUST00000221304 1141 ntBASIC8.41□□□□□ -1.06
Col17a1Q07563 Gm46436-201ENSMUST00000221851 1294 ntBASIC8.41□□□□□ -1.06
Col17a1Q07563 Gm7040-201ENSMUST00000223271 443 ntBASIC8.41□□□□□ -1.06
Col17a1Q07563 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Col17a1Q07563 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col17a1Q07563 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col17a1Q07563 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col17a1Q07563 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col17a1Q07563 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col17a1Q07563 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col17a1Q07563 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC8.41□□□□□ -1.06
Col17a1Q07563 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Col17a1Q07563 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Col17a1Q07563 AC158982.1-205ENSMUST00000227339 1876 ntBASIC8.41□□□□□ -1.06
Col17a1Q07563 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col17a1Q07563 Gm37216-201ENSMUST00000193817 3478 ntBASIC8.4□□□□□ -1.06
Col17a1Q07563 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Col17a1Q07563 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC8.4□□□□□ -1.06
Col17a1Q07563 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.4□□□□□ -1.06
Col17a1Q07563 Gm24581-201ENSMUST00000103962 133 ntBASIC8.4□□□□□ -1.06
Col17a1Q07563 Gm25564-201ENSMUST00000104604 132 ntBASIC8.4□□□□□ -1.06
Col17a1Q07563 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
Col17a1Q07563 Gm10552-201ENSMUST00000113396 372 ntBASIC8.4□□□□□ -1.06
Col17a1Q07563 Gm13924-201ENSMUST00000119899 486 ntBASIC8.4□□□□□ -1.06
Col17a1Q07563 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col17a1Q07563 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col17a1Q07563 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC8.4□□□□□ -1.06
Col17a1Q07563 Gm8599-201ENSMUST00000193033 457 ntBASIC8.4□□□□□ -1.06
Col17a1Q07563 Gm2314-201ENSMUST00000200391 586 ntBASIC8.4□□□□□ -1.06
Col17a1Q07563 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC8.4□□□□□ -1.06
Col17a1Q07563 Gm44830-201ENSMUST00000207667 584 ntBASIC8.4□□□□□ -1.06
Col17a1Q07563 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC8.4□□□□□ -1.06
Col17a1Q07563 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC8.4□□□□□ -1.06
Col17a1Q07563 AC153548.2-201ENSMUST00000219770 885 ntBASIC8.4□□□□□ -1.06
Col17a1Q07563 AC160031.1-201ENSMUST00000219914 522 ntBASIC8.4□□□□□ -1.06
Col17a1Q07563 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Col17a1Q07563 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col17a1Q07563 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Col17a1Q07563 Gm7171-201ENSMUST00000177413 1349 ntBASIC8.4□□□□□ -1.06
Col17a1Q07563 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col17a1Q07563 Ankrd55-205ENSMUST00000223871 3209 ntBASIC8.4□□□□□ -1.06
Col17a1Q07563 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col17a1Q07563 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.07
Col17a1Q07563 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.07
Col17a1Q07563 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Col17a1Q07563 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Col17a1Q07563 Gm5084-202ENSMUST00000224064 3609 ntBASIC8.4□□□□□ -1.07
Col17a1Q07563 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Col17a1Q07563 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Col17a1Q07563 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC8.39□□□□□ -1.07
Col17a1Q07563 Gm23481-201ENSMUST00000104173 131 ntBASIC8.39□□□□□ -1.07
Col17a1Q07563 Gm11914-201ENSMUST00000117094 507 ntBASIC8.39□□□□□ -1.07
Col17a1Q07563 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Col17a1Q07563 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col17a1Q07563 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col17a1Q07563 Gm23993-201ENSMUST00000157478 144 ntBASIC8.39□□□□□ -1.07
Col17a1Q07563 Gm6047-201ENSMUST00000167221 574 ntBASIC8.39□□□□□ -1.07
Col17a1Q07563 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Col17a1Q07563 Gm22177-201ENSMUST00000175002 158 ntBASIC8.39□□□□□ -1.07
Col17a1Q07563 Gm25025-201ENSMUST00000175018 111 ntBASIC8.39□□□□□ -1.07
Col17a1Q07563 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col17a1Q07563 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col17a1Q07563 BX530055.1-201ENSMUST00000197285 122 ntBASIC8.39□□□□□ -1.07
Col17a1Q07563 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC8.39□□□□□ -1.07
Col17a1Q07563 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col17a1Q07563 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col17a1Q07563 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col17a1Q07563 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Col17a1Q07563 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col17a1Q07563 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC8.39□□□□□ -1.07
Col17a1Q07563 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col17a1Q07563 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Col17a1Q07563 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Col17a1Q07563 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col17a1Q07563 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Col17a1Q07563 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col17a1Q07563 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC8.39□□□□□ -1.07
Col17a1Q07563 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col17a1Q07563 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC8.39□□□□□ -1.07
Col17a1Q07563 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Col17a1Q07563 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC8.39□□□□□ -1.07
Col17a1Q07563 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm11835-201ENSMUST00000120635 663 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Mup-ps17-201ENSMUST00000120723 218 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm26167-201ENSMUST00000158423 253 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm38283-201ENSMUST00000193041 695 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm20177-201ENSMUST00000203705 334 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm44754-201ENSMUST00000208155 400 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Col17a1Q07563 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 AC153544.1-201ENSMUST00000217988 400 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC8.38□□□□□ -1.07
Col17a1Q07563 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm37192-201ENSMUST00000194479 1348 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm44586-201ENSMUST00000207166 2737 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms