Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Defa-ps1-201ENSMUST00000119062 282 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Gm12881-201ENSMUST00000121191 203 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Gm14979-201ENSMUST00000121561 1035 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Defa-ps6-201ENSMUST00000122172 282 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Gm22959-201ENSMUST00000122514 303 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox9Q04887 Gm22492-201ENSMUST00000157192 297 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sox9Q04887 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Sox9Q04887 Gm2930-201ENSMUST00000170403 474 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Gm9671-201ENSMUST00000171502 547 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Mir5103-201ENSMUST00000175111 79 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Gm8993-201ENSMUST00000182182 983 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox9Q04887 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox9Q04887 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox9Q04887 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Gm17981-201ENSMUST00000191109 739 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC6.32□□□□□ -1.4
Sox9Q04887 Gm18877-201ENSMUST00000207706 539 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Gm4548-201ENSMUST00000208487 509 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sox9Q04887 Gm8748-201ENSMUST00000211125 587 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.32□□□□□ -1.4
Sox9Q04887 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox9Q04887 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox9Q04887 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox9Q04887 Gm3333-202ENSMUST00000221763 1044 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox9Q04887 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox9Q04887 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Sox9Q04887 AC164297.5-201ENSMUST00000224365 198 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sox9Q04887 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sox9Q04887 Gm24041-201ENSMUST00000083115 156 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox9Q04887 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Sox9Q04887 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox9Q04887 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sox9Q04887 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Sox9Q04887 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox9Q04887 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox9Q04887 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Sox9Q04887 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.32□□□□□ -1.4
Sox9Q04887 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox9Q04887 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox9Q04887 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox9Q04887 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox9Q04887 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox9Q04887 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox9Q04887 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox9Q04887 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sox9Q04887 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox9Q04887 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
Sox9Q04887 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox9Q04887 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox9Q04887 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Sox9Q04887 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox9Q04887 Mir449c-201ENSMUST00000102192 109 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Sox9Q04887 Gm22273-201ENSMUST00000104040 132 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Gm23750-201ENSMUST00000104222 132 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Gm12889-201ENSMUST00000118684 241 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Gm13604-201ENSMUST00000119332 482 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Gm14106-201ENSMUST00000119382 438 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Gm15116-201ENSMUST00000122248 663 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC6.31□□□□□ -1.4
Sox9Q04887 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox9Q04887 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox9Q04887 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.31□□□□□ -1.4
Sox9Q04887 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Sox9Q04887 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Gm18444-201ENSMUST00000191239 629 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.31□□□□□ -1.4
Sox9Q04887 Gm44727-201ENSMUST00000204225 451 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox9Q04887 Gm45082-201ENSMUST00000206082 601 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Gm44773-201ENSMUST00000207374 557 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 AC166323.1-201ENSMUST00000217756 367 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sox9Q04887 AC122937.1-201ENSMUST00000226405 793 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sox9Q04887 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sox9Q04887 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sox9Q04887 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sox9Q04887 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox9Q04887 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.31□□□□□ -1.4
Sox9Q04887 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox9Q04887 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox9Q04887 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms