Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm27820-201ENSMUST00000183628 175 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC5.02□□□□□ -1.61
Scn1bP97952 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.02□□□□□ -1.61
Scn1bP97952 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm8911-201ENSMUST00000213986 652 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.02□□□□□ -1.61
Scn1bP97952 AC154219.1-201ENSMUST00000220764 1262 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scn1bP97952 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Scn1bP97952 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Scn1bP97952 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Scn1bP97952 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Scn1bP97952 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.01□□□□□ -1.61
Scn1bP97952 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Scn1bP97952 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Scn1bP97952 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Scn1bP97952 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.01□□□□□ -1.61
Scn1bP97952 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Gm15185-201ENSMUST00000117397 746 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 Gm8475-201ENSMUST00000118211 526 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 Gm11483-201ENSMUST00000119839 247 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 Gm13998-201ENSMUST00000120952 335 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 Gm8317-201ENSMUST00000121261 471 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 Gm15618-201ENSMUST00000121610 452 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Gm24854-201ENSMUST00000158025 98 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC5.01□□□□□ -1.61
Scn1bP97952 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Scn1bP97952 Atp2b4-208ENSMUST00000167348 243 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.01□□□□□ -1.61
Scn1bP97952 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Scn1bP97952 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Scn1bP97952 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Scn1bP97952 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.01□□□□□ -1.61
Scn1bP97952 Gm28660-201ENSMUST00000186496 253 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.01□□□□□ -1.61
Scn1bP97952 Ighv5-5-201ENSMUST00000193826 329 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 Gm44219-201ENSMUST00000203005 273 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 Gm44817-201ENSMUST00000205416 453 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Scn1bP97952 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.01□□□□□ -1.61
Scn1bP97952 Gm8523-201ENSMUST00000211386 552 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.01□□□□□ -1.61
Scn1bP97952 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 AC174082.2-201ENSMUST00000222094 543 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 AC165260.3-201ENSMUST00000225101 665 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Scn1bP97952 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Scn1bP97952 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Scn1bP97952 Gm25134-201ENSMUST00000082646 160 ntBASIC5.01□□□□□ -1.61
Scn1bP97952 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Scn1bP97952 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Scn1bP97952 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Scn1bP97952 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.01□□□□□ -1.61
Scn1bP97952 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Scn1bP97952 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1bP97952 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scn1bP97952 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scn1bP97952 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn1bP97952 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Scn1bP97952 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn1bP97952 Gm45644-201ENSMUST00000210255 2740 ntBASIC5□□□□□ -1.61
Scn1bP97952 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Scn1bP97952 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scn1bP97952 Mir680-3-201ENSMUST00000102298 87 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gm24272-201ENSMUST00000102329 98 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gm25795-201ENSMUST00000104421 132 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scn1bP97952 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms