Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC4.67□□□□□ -1.66
Nkx3-1P97436 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Nkx3-1P97436 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Nkx3-1P97436 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Nkx3-1P97436 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Nkx3-1P97436 AC107645.1-201ENSMUST00000228660 1810 ntBASIC4.67□□□□□ -1.66
Nkx3-1P97436 Gm37137-201ENSMUST00000195138 2684 ntBASIC4.67□□□□□ -1.66
Nkx3-1P97436 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.67□□□□□ -1.66
Nkx3-1P97436 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm13928-201ENSMUST00000120326 1732 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Nkx3-1P97436 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm11270-201ENSMUST00000117685 471 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm6620-201ENSMUST00000120113 715 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm23883-201ENSMUST00000122686 290 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm26312-201ENSMUST00000157769 165 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm17223-201ENSMUST00000171413 481 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm25019-201ENSMUST00000179732 110 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Mir7012-201ENSMUST00000183900 64 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm29474-201ENSMUST00000187688 379 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm3148-201ENSMUST00000203594 612 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm21041-201ENSMUST00000214829 823 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 CT025665.1-201ENSMUST00000215251 1199 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm6362-201ENSMUST00000217686 836 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm32526-201ENSMUST00000221878 981 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Nkx3-1P97436 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm38387-201ENSMUST00000191945 2577 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC4.66□□□□□ -1.66
Nkx3-1P97436 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC4.66□□□□□ -1.66
Nkx3-1P97436 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Nkx3-1P97436 Gm5844-201ENSMUST00000119417 2191 ntBASIC4.65□□□□□ -1.66
Nkx3-1P97436 Gm4011-201ENSMUST00000174657 2555 ntBASIC4.65□□□□□ -1.66
Nkx3-1P97436 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Nkx3-1P97436 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
Nkx3-1P97436 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Nkx3-1P97436 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Nkx3-1P97436 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Nkx3-1P97436 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
Nkx3-1P97436 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Nkx3-1P97436 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Nkx3-1P97436 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Nkx3-1P97436 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC4.65□□□□□ -1.66
Nkx3-1P97436 Gm45177-201ENSMUST00000209104 2307 ntBASIC4.65□□□□□ -1.66
Nkx3-1P97436 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.67
Nkx3-1P97436 Mir193b-201ENSMUST00000103784 79 ntBASIC4.65□□□□□ -1.67
Nkx3-1P97436 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Nkx3-1P97436 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.65□□□□□ -1.67
Nkx3-1P97436 Gm7206-201ENSMUST00000117730 508 ntBASIC4.65□□□□□ -1.67
Nkx3-1P97436 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.65□□□□□ -1.67
Nkx3-1P97436 Gm23327-201ENSMUST00000157420 78 ntBASIC4.65□□□□□ -1.67
Nkx3-1P97436 Gm22916-201ENSMUST00000157616 119 ntBASIC4.65□□□□□ -1.67
Nkx3-1P97436 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Nkx3-1P97436 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Nkx3-1P97436 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Nkx3-1P97436 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Nkx3-1P97436 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Nkx3-1P97436 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Nkx3-1P97436 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Nkx3-1P97436 Gm20519-201ENSMUST00000173684 359 ntBASIC4.65□□□□□ -1.67
Nkx3-1P97436 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Nkx3-1P97436 Gm28385-201ENSMUST00000185671 292 ntBASIC4.65□□□□□ -1.67
Nkx3-1P97436 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Nkx3-1P97436 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC4.65□□□□□ -1.67
Nkx3-1P97436 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC4.65□□□□□ -1.67
Nkx3-1P97436 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Nkx3-1P97436 AC122305.2-201ENSMUST00000215148 834 ntBASIC4.65□□□□□ -1.67
Nkx3-1P97436 AC153505.2-201ENSMUST00000217741 277 ntBASIC4.65□□□□□ -1.67
Nkx3-1P97436 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.65□□□□□ -1.67
Nkx3-1P97436 AC132317.2-201ENSMUST00000227301 519 ntBASIC4.65□□□□□ -1.67
Nkx3-1P97436 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms