Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PrkdcP97313 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
PrkdcP97313 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
PrkdcP97313 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 Gm11251-201ENSMUST00000119593 2800 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
PrkdcP97313 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PrkdcP97313 Gm12281-201ENSMUST00000119536 298 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 Gm5924-201ENSMUST00000132554 871 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC3.5□□□□□ -1.85
PrkdcP97313 Gm23391-201ENSMUST00000157579 104 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PrkdcP97313 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PrkdcP97313 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PrkdcP97313 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PrkdcP97313 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PrkdcP97313 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 AC134439.1-201ENSMUST00000220923 600 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PrkdcP97313 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PrkdcP97313 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC3.5□□□□□ -1.85
PrkdcP97313 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PrkdcP97313 Gm37606-201ENSMUST00000191816 3116 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PrkdcP97313 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PrkdcP97313 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
PrkdcP97313 Gm44186-201ENSMUST00000204118 2752 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 CT009480.1-201ENSMUST00000225771 4480 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
PrkdcP97313 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 AC164437.5-201ENSMUST00000227235 4414 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Gm11290-204ENSMUST00000224688 3042 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PrkdcP97313 Gm23279-201ENSMUST00000157912 97 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PrkdcP97313 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 AC161269.1-201ENSMUST00000228426 318 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PrkdcP97313 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PrkdcP97313 Gm37364-201ENSMUST00000192533 3920 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
PrkdcP97313 Gm43990-201ENSMUST00000203790 1691 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 C78859-201ENSMUST00000212800 5943 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 Gm37764-201ENSMUST00000194664 2150 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 Gm8498-201ENSMUST00000188227 974 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
PrkdcP97313 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PrkdcP97313 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PrkdcP97313 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 AC139218.1-201ENSMUST00000228215 4287 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PrkdcP97313 Gm37278-201ENSMUST00000191619 2872 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PrkdcP97313 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PrkdcP97313 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 AC139754.3-201ENSMUST00000220444 1627 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 Gm12994-201ENSMUST00000119601 447 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Gm22637-201ENSMUST00000158144 283 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Gm27773-201ENSMUST00000184087 78 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Gm45081-201ENSMUST00000206281 572 ntBASIC3.49□□□□□ -1.85
PrkdcP97313 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PrkdcP97313 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PrkdcP97313 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PrkdcP97313 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PrkdcP97313 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Gm37400-201ENSMUST00000193148 3605 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Gm45290-201ENSMUST00000211177 3890 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.48□□□□□ -1.85
PrkdcP97313 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
PrkdcP97313 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
PrkdcP97313 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC3.48□□□□□ -1.85
PrkdcP97313 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Gm23228-201ENSMUST00000157296 270 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms