Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hmgb1P63158 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hmgb1P63158 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC6.6□□□□□ -1.35
Hmgb1P63158 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hmgb1P63158 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hmgb1P63158 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hmgb1P63158 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hmgb1P63158 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm15018-201ENSMUST00000117090 633 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC6.6□□□□□ -1.35
Hmgb1P63158 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hmgb1P63158 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.6□□□□□ -1.35
Hmgb1P63158 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Snora47-201ENSMUST00000157483 138 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm18522-201ENSMUST00000173947 650 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Hmgb1P63158 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm26915-201ENSMUST00000183080 748 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hmgb1P63158 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm29105-201ENSMUST00000187256 450 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm29610-201ENSMUST00000187749 453 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm38237-201ENSMUST00000193366 376 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm37883-201ENSMUST00000194970 725 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm32453-201ENSMUST00000204183 456 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hmgb1P63158 AC159622.1-201ENSMUST00000221004 554 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm6474-201ENSMUST00000223250 699 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 AC170086.1-201ENSMUST00000225190 497 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 AC140393.2-201ENSMUST00000226894 943 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm23624-201ENSMUST00000082463 321 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 Gm24041-201ENSMUST00000083115 156 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hmgb1P63158 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hmgb1P63158 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.6□□□□□ -1.35
Hmgb1P63158 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hmgb1P63158 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Hmgb1P63158 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hmgb1P63158 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm37776-201ENSMUST00000193471 2497 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hmgb1P63158 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hmgb1P63158 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hmgb1P63158 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Hmgb1P63158 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm7988-201ENSMUST00000196623 2297 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm43613-201ENSMUST00000199409 1613 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Hmgb1P63158 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm13733-201ENSMUST00000117290 535 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm14054-201ENSMUST00000120744 704 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm12396-201ENSMUST00000121600 306 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm13131-201ENSMUST00000122228 321 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm17063-201ENSMUST00000168135 456 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm22642-201ENSMUST00000175352 252 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm10925-201ENSMUST00000189941 678 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm3489-201ENSMUST00000190083 528 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm3933-201ENSMUST00000195391 439 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm18611-201ENSMUST00000200334 1118 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm43136-201ENSMUST00000200403 636 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hmgb1P63158 Gm19269-201ENSMUST00000211401 804 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Hmgb1P63158 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Hmgb1P63158 AC159205.4-201ENSMUST00000225964 704 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 AC133517.2-201ENSMUST00000226820 690 ntBASIC6.59□□□□□ -1.35
Hmgb1P63158 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms