Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm38040-201ENSMUST00000193505 225 ntBASIC6.37□□□□□ -1.39
Traf1P39428 Gm18036-201ENSMUST00000195256 272 ntBASIC6.37□□□□□ -1.39
Traf1P39428 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.37□□□□□ -1.39
Traf1P39428 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Traf1P39428 Clec2j-201ENSMUST00000032517 515 ntBASIC6.37□□□□□ -1.39
Traf1P39428 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Traf1P39428 Mir188-201ENSMUST00000083464 68 ntBASIC6.37□□□□□ -1.39
Traf1P39428 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Traf1P39428 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.37□□□□□ -1.39
Traf1P39428 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Traf1P39428 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Traf1P39428 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Traf1P39428 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Traf1P39428 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Traf1P39428 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Traf1P39428 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Traf1P39428 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Traf1P39428 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Traf1P39428 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Traf1P39428 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Traf1P39428 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Traf1P39428 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Traf1P39428 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Gm18493-201ENSMUST00000192084 1612 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Traf1P39428 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.36□□□□□ -1.39
Traf1P39428 Gm12683-201ENSMUST00000117528 415 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Gm12850-201ENSMUST00000119210 436 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Gm14472-201ENSMUST00000119815 282 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC6.36□□□□□ -1.39
Traf1P39428 Gm22106-201ENSMUST00000122544 127 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Gm26170-201ENSMUST00000158419 148 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Gm17142-201ENSMUST00000164933 645 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Gm24561-201ENSMUST00000175182 95 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Gm22411-201ENSMUST00000175462 126 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Gm22002-201ENSMUST00000175622 125 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC6.36□□□□□ -1.39
Traf1P39428 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Traf1P39428 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC6.36□□□□□ -1.39
Traf1P39428 Trbv27-201ENSMUST00000193711 277 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Gm43712-201ENSMUST00000198020 291 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Gm4587-201ENSMUST00000209135 637 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC6.36□□□□□ -1.39
Traf1P39428 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC6.36□□□□□ -1.39
Traf1P39428 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.36□□□□□ -1.39
Traf1P39428 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC6.36□□□□□ -1.39
Traf1P39428 CT010486.1-201ENSMUST00000224609 422 ntBASIC6.36□□□□□ -1.39
Traf1P39428 AV026068-224ENSMUST00000224827 928 ntBASIC6.36□□□□□ -1.39
Traf1P39428 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.36□□□□□ -1.39
Traf1P39428 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Traf1P39428 Gm45644-201ENSMUST00000210255 2740 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Gm38067-201ENSMUST00000192346 1911 ntBASIC6.36□□□□□ -1.39
Traf1P39428 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Traf1P39428 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Traf1P39428 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
Traf1P39428 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Traf1P39428 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6.36□□□□□ -1.39
Traf1P39428 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.36□□□□□ -1.39
Traf1P39428 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Traf1P39428 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Traf1P39428 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Traf1P39428 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Traf1P39428 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Traf1P39428 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Traf1P39428 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Traf1P39428 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Traf1P39428 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC6.35□□□□□ -1.39
Traf1P39428 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Traf1P39428 Gm11561-201ENSMUST00000117429 417 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm15490-201ENSMUST00000119894 387 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm13924-201ENSMUST00000119899 486 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm14601-201ENSMUST00000120892 236 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC6.35□□□□□ -1.39
Traf1P39428 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Traf1P39428 Gm7281-201ENSMUST00000160010 543 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Traf1P39428 Gm23872-201ENSMUST00000175432 77 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC6.35□□□□□ -1.39
Traf1P39428 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms