Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.98□□□□□ -1.45
Col2a1P28481 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col2a1P28481 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Col2a1P28481 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col2a1P28481 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col2a1P28481 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Col2a1P28481 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col2a1P28481 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.98□□□□□ -1.45
Col2a1P28481 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.98□□□□□ -1.45
Col2a1P28481 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
Col2a1P28481 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Col2a1P28481 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.98□□□□□ -1.45
Col2a1P28481 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.98□□□□□ -1.45
Col2a1P28481 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col2a1P28481 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.98□□□□□ -1.45
Col2a1P28481 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Col2a1P28481 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col2a1P28481 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col2a1P28481 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col2a1P28481 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col2a1P28481 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col2a1P28481 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col2a1P28481 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col2a1P28481 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Col2a1P28481 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.97□□□□□ -1.45
Col2a1P28481 Gm25179-201ENSMUST00000122632 128 ntBASIC5.97□□□□□ -1.45
Col2a1P28481 Gm22804-201ENSMUST00000158052 101 ntBASIC5.97□□□□□ -1.45
Col2a1P28481 Gm23513-201ENSMUST00000158181 133 ntBASIC5.97□□□□□ -1.45
Col2a1P28481 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col2a1P28481 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col2a1P28481 Gm27688-201ENSMUST00000183634 91 ntBASIC5.97□□□□□ -1.45
Col2a1P28481 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.97□□□□□ -1.45
Col2a1P28481 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col2a1P28481 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.97□□□□□ -1.45
Col2a1P28481 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.97□□□□□ -1.45
Col2a1P28481 Gm19936-201ENSMUST00000216414 838 ntBASIC5.97□□□□□ -1.45
Col2a1P28481 Gm5750-201ENSMUST00000218711 801 ntBASIC5.97□□□□□ -1.45
Col2a1P28481 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.97□□□□□ -1.45
Col2a1P28481 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.97□□□□□ -1.45
Col2a1P28481 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col2a1P28481 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
Col2a1P28481 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.97□□□□□ -1.45
Col2a1P28481 Gm23796-201ENSMUST00000084011 160 ntBASIC5.97□□□□□ -1.45
Col2a1P28481 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Col2a1P28481 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col2a1P28481 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.97□□□□□ -1.45
Col2a1P28481 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col2a1P28481 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col2a1P28481 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.97□□□□□ -1.45
Col2a1P28481 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.97□□□□□ -1.45
Col2a1P28481 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.97□□□□□ -1.45
Col2a1P28481 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col2a1P28481 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.97□□□□□ -1.45
Col2a1P28481 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.97□□□□□ -1.45
Col2a1P28481 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col2a1P28481 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Col2a1P28481 Gm14086-201ENSMUST00000117152 173 ntBASIC5.96□□□□□ -1.45
Col2a1P28481 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.96□□□□□ -1.45
Col2a1P28481 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col2a1P28481 Gm27286-201ENSMUST00000184934 179 ntBASIC5.96□□□□□ -1.45
Col2a1P28481 Gm2497-201ENSMUST00000189539 601 ntBASIC5.96□□□□□ -1.45
Col2a1P28481 Gm10048-201ENSMUST00000194196 372 ntBASIC5.96□□□□□ -1.45
Col2a1P28481 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.96□□□□□ -1.45
Col2a1P28481 Gm44307-201ENSMUST00000204466 764 ntBASIC5.96□□□□□ -1.45
Col2a1P28481 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.96□□□□□ -1.45
Col2a1P28481 Gm6906-201ENSMUST00000218014 569 ntBASIC5.96□□□□□ -1.45
Col2a1P28481 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.96□□□□□ -1.45
Col2a1P28481 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.96□□□□□ -1.45
Col2a1P28481 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.96□□□□□ -1.45
Col2a1P28481 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.96□□□□□ -1.45
Col2a1P28481 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Col2a1P28481 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
Col2a1P28481 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC5.96□□□□□ -1.45
Col2a1P28481 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col2a1P28481 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col2a1P28481 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.96□□□□□ -1.45
Col2a1P28481 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.96□□□□□ -1.45
Col2a1P28481 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.96□□□□□ -1.45
Col2a1P28481 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.45
Col2a1P28481 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.96□□□□□ -1.46
Col2a1P28481 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Col2a1P28481 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Col2a1P28481 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col2a1P28481 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col2a1P28481 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col2a1P28481 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col2a1P28481 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col2a1P28481 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Col2a1P28481 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col2a1P28481 Gm14831-201ENSMUST00000120253 409 ntBASIC5.96□□□□□ -1.46
Col2a1P28481 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col2a1P28481 Gm26310-201ENSMUST00000157766 117 ntBASIC5.96□□□□□ -1.46
Col2a1P28481 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col2a1P28481 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Col2a1P28481 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC5.96□□□□□ -1.46
Col2a1P28481 Gm9317-201ENSMUST00000197055 862 ntBASIC5.96□□□□□ -1.46
Col2a1P28481 Mir5121-201ENSMUST00000198528 74 ntBASIC5.96□□□□□ -1.46
Col2a1P28481 Gm2607-201ENSMUST00000212389 627 ntBASIC5.96□□□□□ -1.46
Col2a1P28481 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.96□□□□□ -1.46
Col2a1P28481 Snord15b-201ENSMUST00000083032 145 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms