Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm22991-201ENSMUST00000178126 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm25754-201ENSMUST00000178653 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm22419-201ENSMUST00000178780 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm24802-201ENSMUST00000178897 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm25208-201ENSMUST00000178964 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm24567-201ENSMUST00000179294 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm23943-201ENSMUST00000179712 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm25228-201ENSMUST00000180121 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm23304-201ENSMUST00000180209 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm27690-201ENSMUST00000184596 126 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm4412-201ENSMUST00000186660 433 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col1a1P11087 Gm9134-201ENSMUST00000193186 551 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm18864-201ENSMUST00000194518 1051 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC6.16□□□□□ -1.42
Col1a1P11087 AC137117.1-201ENSMUST00000226912 441 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col1a1P11087 Mir20a-201ENSMUST00000083508 107 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col1a1P11087 Mir199a-2-201ENSMUST00000093618 110 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col1a1P11087 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col1a1P11087 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col1a1P11087 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col1a1P11087 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col1a1P11087 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col1a1P11087 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col1a1P11087 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Col1a1P11087 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col1a1P11087 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col1a1P11087 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col1a1P11087 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col1a1P11087 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Col1a1P11087 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col1a1P11087 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.16□□□□□ -1.42
Col1a1P11087 Gm42559-201ENSMUST00000201811 3532 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col1a1P11087 Gm16082-201ENSMUST00000115992 377 ntBASIC6.15□□□□□ -1.42
Col1a1P11087 Gm8145-201ENSMUST00000118220 745 ntBASIC6.15□□□□□ -1.42
Col1a1P11087 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC6.15□□□□□ -1.42
Col1a1P11087 Mir6899-201ENSMUST00000184798 64 ntBASIC6.15□□□□□ -1.42
Col1a1P11087 Gm5372-201ENSMUST00000187540 409 ntBASIC6.15□□□□□ -1.42
Col1a1P11087 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col1a1P11087 Gm29036-201ENSMUST00000189967 877 ntBASIC6.15□□□□□ -1.42
Col1a1P11087 Gm37503-201ENSMUST00000192088 319 ntBASIC6.15□□□□□ -1.42
Col1a1P11087 Gm5285-201ENSMUST00000193089 666 ntBASIC6.15□□□□□ -1.42
Col1a1P11087 Gm6051-201ENSMUST00000201529 352 ntBASIC6.15□□□□□ -1.42
Col1a1P11087 Gm18599-201ENSMUST00000206729 1125 ntBASIC6.15□□□□□ -1.42
Col1a1P11087 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC6.15□□□□□ -1.42
Col1a1P11087 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col1a1P11087 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.15□□□□□ -1.42
Col1a1P11087 AC154851.1-201ENSMUST00000221591 655 ntBASIC6.15□□□□□ -1.42
Col1a1P11087 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col1a1P11087 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col1a1P11087 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col1a1P11087 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col1a1P11087 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col1a1P11087 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col1a1P11087 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Col1a1P11087 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Col1a1P11087 AC154640.4-201ENSMUST00000226647 4640 ntBASIC6.15□□□□□ -1.42
Col1a1P11087 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col1a1P11087 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
Col1a1P11087 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
Col1a1P11087 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col1a1P11087 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col1a1P11087 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC6.15□□□□□ -1.43
Col1a1P11087 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Col1a1P11087 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col1a1P11087 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Col1a1P11087 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col1a1P11087 Gm14756-201ENSMUST00000116395 240 ntBASIC6.15□□□□□ -1.43
Col1a1P11087 Gm14172-201ENSMUST00000118255 644 ntBASIC6.15□□□□□ -1.43
Col1a1P11087 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC6.15□□□□□ -1.43
Col1a1P11087 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col1a1P11087 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC6.15□□□□□ -1.43
Col1a1P11087 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.15□□□□□ -1.43
Col1a1P11087 Gm28116-201ENSMUST00000189064 387 ntBASIC6.15□□□□□ -1.43
Col1a1P11087 Gm37209-201ENSMUST00000194109 1276 ntBASIC6.15□□□□□ -1.43
Col1a1P11087 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC6.15□□□□□ -1.43
Col1a1P11087 Gm8458-201ENSMUST00000196658 819 ntBASIC6.15□□□□□ -1.43
Col1a1P11087 Gm2622-201ENSMUST00000200018 471 ntBASIC6.15□□□□□ -1.43
Col1a1P11087 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col1a1P11087 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col1a1P11087 Gm7128-201ENSMUST00000211639 533 ntBASIC6.15□□□□□ -1.43
Col1a1P11087 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col1a1P11087 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col1a1P11087 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.15□□□□□ -1.43
Col1a1P11087 n-R5s170-201ENSMUST00000083726 113 ntBASIC6.15□□□□□ -1.43
Col1a1P11087 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col1a1P11087 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.15□□□□□ -1.43
Col1a1P11087 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col1a1P11087 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col1a1P11087 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col1a1P11087 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Col1a1P11087 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.14□□□□□ -1.43
Col1a1P11087 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.14□□□□□ -1.43
Col1a1P11087 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col1a1P11087 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms