Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Hoxa9P09631 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxa9P09631 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Hoxa9P09631 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Hoxa9P09631 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.49□□□□□ -1.53
Hoxa9P09631 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxa9P09631 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxa9P09631 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxa9P09631 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.49□□□□□ -1.53
Hoxa9P09631 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxa9P09631 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Hoxa9P09631 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxa9P09631 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxa9P09631 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Hoxa9P09631 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Hoxa9P09631 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Hoxa9P09631 Gm11561-201ENSMUST00000117429 417 ntBASIC5.49□□□□□ -1.53
Hoxa9P09631 Gm11369-201ENSMUST00000120812 318 ntBASIC5.49□□□□□ -1.53
Hoxa9P09631 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.49□□□□□ -1.53
Hoxa9P09631 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Hoxa9P09631 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxa9P09631 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.49□□□□□ -1.53
Hoxa9P09631 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.49□□□□□ -1.53
Hoxa9P09631 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.49□□□□□ -1.53
Hoxa9P09631 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxa9P09631 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Hoxa9P09631 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxa9P09631 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxa9P09631 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxa9P09631 Gm18698-201ENSMUST00000192327 668 ntBASIC5.49□□□□□ -1.53
Hoxa9P09631 Gm2979-201ENSMUST00000193442 463 ntBASIC5.49□□□□□ -1.53
Hoxa9P09631 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxa9P09631 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Hoxa9P09631 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Hoxa9P09631 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.49□□□□□ -1.53
Hoxa9P09631 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.49□□□□□ -1.53
Hoxa9P09631 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.49□□□□□ -1.53
Hoxa9P09631 Gm9386-201ENSMUST00000095195 381 ntBASIC5.49□□□□□ -1.53
Hoxa9P09631 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Hoxa9P09631 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxa9P09631 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.49□□□□□ -1.53
Hoxa9P09631 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Hoxa9P09631 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Hoxa9P09631 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Hoxa9P09631 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxa9P09631 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.49□□□□□ -1.53
Hoxa9P09631 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hoxa9P09631 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxa9P09631 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Hoxa9P09631 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Hoxa9P09631 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
Hoxa9P09631 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm24789-201ENSMUST00000104282 131 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm15493-201ENSMUST00000119461 528 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm23883-201ENSMUST00000122686 290 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm25293-201ENSMUST00000122792 285 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm22160-201ENSMUST00000158405 328 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm23207-201ENSMUST00000158665 102 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm23806-201ENSMUST00000175157 109 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm37882-201ENSMUST00000195254 196 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm18537-201ENSMUST00000205709 989 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm18850-201ENSMUST00000211578 388 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm7688-201ENSMUST00000212857 337 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm19189-201ENSMUST00000221689 754 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxa9P09631 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Hoxa9P09631 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.48□□□□□ -1.53
Hoxa9P09631 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.48□□□□□ -1.53
Hoxa9P09631 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxa9P09631 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxa9P09631 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxa9P09631 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.48□□□□□ -1.53
Hoxa9P09631 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hoxa9P09631 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.48□□□□□ -1.53
Hoxa9P09631 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.47□□□□□ -1.53
Hoxa9P09631 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.47□□□□□ -1.53
Hoxa9P09631 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxa9P09631 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.47□□□□□ -1.53
Hoxa9P09631 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.47□□□□□ -1.53
Hoxa9P09631 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxa9P09631 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Hoxa9P09631 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxa9P09631 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxa9P09631 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.47□□□□□ -1.53
Hoxa9P09631 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms