Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Gm27148-201ENSMUST00000185086 160 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Gm19774-201ENSMUST00000190667 114 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Gm29736-201ENSMUST00000198189 385 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 AC154419.1-201ENSMUST00000227627 272 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Gm37143-201ENSMUST00000195180 3259 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Gm24124-201ENSMUST00000104103 132 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Gm12982-201ENSMUST00000117408 190 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Gm23789-201ENSMUST00000122536 301 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Gm6802-202ENSMUST00000186566 126 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Gm18183-201ENSMUST00000191024 615 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Gm25260-201ENSMUST00000083053 134 ntBASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Gm12095-201ENSMUST00000121962 816 ntBASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Gm22342-201ENSMUST00000122647 298 ntBASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Gm12379-201ENSMUST00000119607 391 ntBASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Gm29228-201ENSMUST00000185489 418 ntBASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Gm22456-201ENSMUST00000082578 125 ntBASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
Col6a3E9PWQ3 Lrrc15-201ENSMUST00000064606 5310 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm14909-201ENSMUST00000117853 351 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm12181-201ENSMUST00000121448 531 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm7281-201ENSMUST00000160010 543 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm37343-201ENSMUST00000192542 111 ntBASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC5.03□□□□□ -1.6
Col6a3E9PWQ3 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms