Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm20287-201ENSMUST00000172848 2367 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm37509-201ENSMUST00000194867 3169 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm11833-201ENSMUST00000118393 853 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm12884-201ENSMUST00000120371 325 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm44603-201ENSMUST00000206820 367 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 AC183268.2-201ENSMUST00000214513 446 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 AC124420.1-201ENSMUST00000219779 791 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Mir412-201ENSMUST00000083636 80 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm37248-201ENSMUST00000193576 3174 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm5594-201ENSMUST00000172712 1429 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 AC124183.1-201ENSMUST00000222367 2135 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm11925-201ENSMUST00000121375 535 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm22725-201ENSMUST00000158092 110 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm31931-201ENSMUST00000219666 222 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Gm23796-201ENSMUST00000084011 160 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Gm45413-201ENSMUST00000210389 3538 ntBASIC4.42□□□□□ -1.7
Col6a4A2AX52 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Gm43359-201ENSMUST00000197944 2200 ntBASIC4.42□□□□□ -1.7
Col6a4A2AX52 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Gm7657-201ENSMUST00000118851 666 ntBASIC4.42□□□□□ -1.7
Col6a4A2AX52 Gm15400-201ENSMUST00000118944 601 ntBASIC4.42□□□□□ -1.7
Col6a4A2AX52 Gm7840-201ENSMUST00000122086 533 ntBASIC4.42□□□□□ -1.7
Col6a4A2AX52 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Gm24113-201ENSMUST00000157477 276 ntBASIC4.42□□□□□ -1.7
Col6a4A2AX52 Gm23993-201ENSMUST00000157478 144 ntBASIC4.42□□□□□ -1.7
Col6a4A2AX52 Gm17081-201ENSMUST00000167363 478 ntBASIC4.42□□□□□ -1.7
Col6a4A2AX52 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Gm28097-201ENSMUST00000187333 366 ntBASIC4.42□□□□□ -1.7
Col6a4A2AX52 Gm6009-201ENSMUST00000210848 280 ntBASIC4.42□□□□□ -1.7
Col6a4A2AX52 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Gm44424-201ENSMUST00000203438 1826 ntBASIC4.42□□□□□ -1.7
Col6a4A2AX52 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col6a4A2AX52 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm20453-201ENSMUST00000173968 226 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms