Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim3Q9R1R2 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm28240-201ENSMUST00000187560 2053 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm14220-201ENSMUST00000118114 449 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm15493-201ENSMUST00000119461 528 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm25291-201ENSMUST00000122795 144 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Mir3473g-201ENSMUST00000183494 136 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm8826-201ENSMUST00000193161 948 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm42522-201ENSMUST00000196071 255 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm5284-201ENSMUST00000199053 903 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm4874-201ENSMUST00000203589 691 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm43945-201ENSMUST00000203595 754 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm45359-201ENSMUST00000210635 427 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.11□□□□□ -1.59
Trim3Q9R1R2 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Trim3Q9R1R2 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm13033-201ENSMUST00000117591 1057 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm15741-201ENSMUST00000119401 754 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Mir1970-201ENSMUST00000157839 104 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm6872-201ENSMUST00000165001 700 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm23872-201ENSMUST00000175432 77 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm18553-201ENSMUST00000194152 634 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm37659-201ENSMUST00000194574 111 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms