Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Trim39Q9ESN2 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim39Q9ESN2 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim39Q9ESN2 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim39Q9ESN2 CT573019.1-201ENSMUST00000227762 1689 ntBASIC6.44□□□□□ -1.38
Trim39Q9ESN2 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim39Q9ESN2 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.44□□□□□ -1.38
Trim39Q9ESN2 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim39Q9ESN2 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Trim39Q9ESN2 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim39Q9ESN2 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim39Q9ESN2 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim39Q9ESN2 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim39Q9ESN2 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim39Q9ESN2 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim39Q9ESN2 Gm43781-201ENSMUST00000197634 2681 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm26156-201ENSMUST00000116999 123 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm12306-201ENSMUST00000117256 171 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm15054-201ENSMUST00000117393 281 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm10243-201ENSMUST00000117571 333 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm14783-201ENSMUST00000118900 663 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm11719-201ENSMUST00000119399 351 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Mup-ps21-201ENSMUST00000119998 448 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm24418-201ENSMUST00000177597 79 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm24639-201ENSMUST00000178518 79 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm23076-201ENSMUST00000179082 79 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm25077-201ENSMUST00000179157 79 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm8357-201ENSMUST00000181115 1011 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm27018-201ENSMUST00000181136 225 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm5147-201ENSMUST00000185999 794 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm36998-201ENSMUST00000193205 704 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm37322-201ENSMUST00000193409 337 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm43513-201ENSMUST00000199779 1076 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm3690-201ENSMUST00000211341 262 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 AC069561.3-201ENSMUST00000217321 114 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm19217-201ENSMUST00000218238 328 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm8681-201ENSMUST00000219115 618 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 AC139941.1-201ENSMUST00000221517 478 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm36758-201ENSMUST00000222594 310 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 AC104832.1-201ENSMUST00000222938 550 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 AC138667.2-201ENSMUST00000224880 598 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm16020-201ENSMUST00000084281 210 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 AC154747.4-203ENSMUST00000225893 1384 ntBASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim39Q9ESN2 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Trim39Q9ESN2 Gm15095-201ENSMUST00000118996 1430 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms