Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm8256-203ENSMUST00000228692 591 ntBASIC6.99□□□□□ -1.29
Clp1Q99LI9 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.99□□□□□ -1.29
Clp1Q99LI9 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clp1Q99LI9 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm14404-201ENSMUST00000119117 1660 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm14000-201ENSMUST00000118670 233 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm11533-201ENSMUST00000120287 477 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm14982-201ENSMUST00000121102 442 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Mup-ps22-201ENSMUST00000121611 243 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm22199-201ENSMUST00000122660 126 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm26037-201ENSMUST00000158150 311 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm23071-201ENSMUST00000158242 115 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm22548-201ENSMUST00000174899 78 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Snord116l12-201ENSMUST00000179816 94 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm7952-201ENSMUST00000180540 984 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm27853-201ENSMUST00000184176 250 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Mir7674-201ENSMUST00000184964 63 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Mrgprb13-201ENSMUST00000188191 985 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm8458-201ENSMUST00000196658 819 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm43717-201ENSMUST00000198684 310 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm5990-201ENSMUST00000203126 746 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm44312-201ENSMUST00000203536 469 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Olfr1309-201ENSMUST00000207885 964 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm8667-201ENSMUST00000211112 449 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 AC069561.3-201ENSMUST00000217321 114 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm43873-201ENSMUST00000204505 3938 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.98□□□□□ -1.29
Clp1Q99LI9 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clp1Q99LI9 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 AC159195.2-201ENSMUST00000223670 3757 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm24173-201ENSMUST00000104130 128 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm7146-201ENSMUST00000116079 739 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm11890-201ENSMUST00000119585 417 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm14805-201ENSMUST00000120172 340 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm15781-201ENSMUST00000120216 323 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Gm11692-201ENSMUST00000122121 902 ntBASIC6.97□□□□□ -1.29
Clp1Q99LI9 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.97□□□□□ -1.29
Clp1Q99LI9 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms