Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm43148-201ENSMUST00000198237 520 ntBASIC6.55□□□□□ -1.36
Ccdc9Q8VC31 Gm5735-201ENSMUST00000207053 167 ntBASIC6.55□□□□□ -1.36
Ccdc9Q8VC31 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc9Q8VC31 AC122034.1-201ENSMUST00000227641 595 ntBASIC6.55□□□□□ -1.36
Ccdc9Q8VC31 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.55□□□□□ -1.36
Ccdc9Q8VC31 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc9Q8VC31 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc9Q8VC31 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.55□□□□□ -1.36
Ccdc9Q8VC31 Gm44829-201ENSMUST00000208008 3193 ntBASIC6.55□□□□□ -1.36
Ccdc9Q8VC31 Gm43668-201ENSMUST00000197014 5342 ntBASIC6.55□□□□□ -1.36
Ccdc9Q8VC31 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc9Q8VC31 Gm37607-201ENSMUST00000194925 2623 ntBASIC6.55□□□□□ -1.36
Ccdc9Q8VC31 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc9Q8VC31 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ccdc9Q8VC31 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc9Q8VC31 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm22284-201ENSMUST00000104132 132 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm15765-201ENSMUST00000118407 910 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm6461-201ENSMUST00000120015 633 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm15181-201ENSMUST00000120142 177 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm15596-201ENSMUST00000121139 784 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm7494-201ENSMUST00000121248 441 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm15164-201ENSMUST00000122203 271 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm26162-201ENSMUST00000157793 132 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm24812-201ENSMUST00000175315 284 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm37135-201ENSMUST00000192652 534 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm7181-201ENSMUST00000202197 434 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm44820-201ENSMUST00000207420 396 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 CT030242.3-201ENSMUST00000221231 581 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 AC152169.2-201ENSMUST00000224558 613 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.54□□□□□ -1.36
Ccdc9Q8VC31 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm12369-201ENSMUST00000121343 942 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm12332-201ENSMUST00000121397 922 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm8722-201ENSMUST00000121466 769 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm13487-201ENSMUST00000122240 864 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm25653-201ENSMUST00000158473 138 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm5139-201ENSMUST00000175943 249 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm3148-201ENSMUST00000203594 612 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm9278-201ENSMUST00000205508 553 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm45733-201ENSMUST00000212988 437 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 AC168059.2-201ENSMUST00000224473 333 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms