Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm39164-202ENSMUST00000211519 236 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim35Q8C006 Dppa5b-201ENSMUST00000214261 348 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Dppa5c-201ENSMUST00000216268 348 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm6150-201ENSMUST00000217775 577 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 AC140288.1-201ENSMUST00000226329 503 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Trim35Q8C006 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim35Q8C006 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim35Q8C006 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim35Q8C006 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm4927-201ENSMUST00000219548 1318 ntBASIC8.46□□□□□ -1.06
Trim35Q8C006 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Trim35Q8C006 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim35Q8C006 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim35Q8C006 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim35Q8C006 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim35Q8C006 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC8.46□□□□□ -1.06
Trim35Q8C006 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Trim35Q8C006 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim35Q8C006 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim35Q8C006 AC163342.1-201ENSMUST00000216533 2718 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim35Q8C006 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm45294-201ENSMUST00000210685 2102 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 AC126028.1-201ENSMUST00000226218 2123 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim35Q8C006 Pex5l-205ENSMUST00000108225 3109 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim35Q8C006 Abhd12b-206ENSMUST00000182927 1544 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim35Q8C006 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm38067-201ENSMUST00000192346 1911 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm43736-201ENSMUST00000196377 2281 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim35Q8C006 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim35Q8C006 Mir704-201ENSMUST00000102106 77 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm23651-201ENSMUST00000116755 120 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm14630-201ENSMUST00000118057 246 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm14082-201ENSMUST00000118582 801 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm9050-201ENSMUST00000119501 448 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm14141-201ENSMUST00000120236 783 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm13576-201ENSMUST00000120851 778 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Iqcc-202ENSMUST00000121442 491 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm5270-201ENSMUST00000121506 1002 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm13406-201ENSMUST00000121991 256 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm13056-201ENSMUST00000142429 564 ntTSL 2 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Zakit-201ENSMUST00000157677 308 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm23781-201ENSMUST00000157940 308 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm24577-201ENSMUST00000158580 63 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm16238-201ENSMUST00000159343 586 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm16585-201ENSMUST00000161442 610 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm17065-201ENSMUST00000165245 239 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Mir8110-201ENSMUST00000183771 97 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm28527-201ENSMUST00000185210 297 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm8596-201ENSMUST00000188004 792 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm29140-201ENSMUST00000190187 476 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm34073-201ENSMUST00000195736 212 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm2566-201ENSMUST00000201267 431 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim35Q8C006 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm35177-201ENSMUST00000216525 623 ntTSL 3 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm6989-201ENSMUST00000218409 654 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 AC153974.1-201ENSMUST00000219012 430 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim35Q8C006 AC211878.2-201ENSMUST00000222486 488 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 AC134254.3-201ENSMUST00000223533 575 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Zmiz2-203ENSMUST00000109785 3542 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm46995-201ENSMUST00000223445 1378 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim35Q8C006 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim35Q8C006 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Olfr958-202ENSMUST00000215505 3514 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm46339-201ENSMUST00000222720 3539 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim35Q8C006 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Trim35Q8C006 Gm29084-201ENSMUST00000185587 1452 ntBASIC8.45□□□□□ -1.06
Trim35Q8C006 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Trim35Q8C006 Morf4l2-214ENSMUST00000166930 1926 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Trim35Q8C006 Drp2-202ENSMUST00000113224 4147 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim35Q8C006 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim35Q8C006 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Trim35Q8C006 Gm42759-201ENSMUST00000195915 2439 ntBASIC8.44□□□□□ -1.06
Trim35Q8C006 Gca-201ENSMUST00000028257 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim35Q8C006 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Trim35Q8C006 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim35Q8C006 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim35Q8C006 AC187103.2-201ENSMUST00000223605 1617 ntBASIC8.44□□□□□ -1.06
Trim35Q8C006 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim35Q8C006 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim35Q8C006 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim35Q8C006 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Trim35Q8C006 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 124.2 ms