Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm24186-201ENSMUST00000157983 127 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm16125-201ENSMUST00000159003 339 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm27541-201ENSMUST00000184078 122 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm27781-201ENSMUST00000185185 92 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm28429-201ENSMUST00000188521 363 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm43554-201ENSMUST00000199987 186 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Thoc7-209ENSMUST00000225325 765 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Zfp850-201ENSMUST00000099111 941 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm14871-201ENSMUST00000119056 194 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm26350-201ENSMUST00000157531 288 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm24295-201ENSMUST00000158298 131 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm8256-201ENSMUST00000169178 453 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm2959-201ENSMUST00000169844 621 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm28683-201ENSMUST00000187134 615 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm28840-205ENSMUST00000189320 615 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm28835-203ENSMUST00000190062 615 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm28467-201ENSMUST00000190981 318 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm43945-201ENSMUST00000203595 754 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.66□□□□□ -1.5
Upf3bQ3ULL6 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Gm14563-201ENSMUST00000120571 354 ntBASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Gm12583-201ENSMUST00000120677 853 ntBASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Gm7670-201ENSMUST00000121272 641 ntBASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Gm25176-201ENSMUST00000122640 125 ntBASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Gm10784-201ENSMUST00000178715 238 ntBASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Gm37072-201ENSMUST00000194570 837 ntBASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Gm38360-201ENSMUST00000195130 454 ntBASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Mir133b-201ENSMUST00000083546 119 ntBASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Gm26163-201ENSMUST00000083792 178 ntBASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Upf3bQ3ULL6 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Upf3bQ3ULL6 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Upf3bQ3ULL6 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.65□□□□□ -1.51
Upf3bQ3ULL6 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Upf3bQ3ULL6 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Upf3bQ3ULL6 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.65□□□□□ -1.51
Upf3bQ3ULL6 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms