Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm26075-201ENSMUST00000104062 121 ntBASIC8.44□□□□□ -1.06
Col17a1Q07563 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC8.44□□□□□ -1.06
Col17a1Q07563 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Col17a1Q07563 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC8.44□□□□□ -1.06
Col17a1Q07563 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC8.44□□□□□ -1.06
Col17a1Q07563 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC8.44□□□□□ -1.06
Col17a1Q07563 AC154838.2-201ENSMUST00000226602 747 ntBASIC8.44□□□□□ -1.06
Col17a1Q07563 AC154283.1-201ENSMUST00000228417 389 ntBASIC8.44□□□□□ -1.06
Col17a1Q07563 AC136376.1-201ENSMUST00000228496 950 ntBASIC8.44□□□□□ -1.06
Col17a1Q07563 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Col17a1Q07563 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Col17a1Q07563 Gm42540-201ENSMUST00000200319 2008 ntBASIC8.44□□□□□ -1.06
Col17a1Q07563 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Gm37076-201ENSMUST00000192033 2294 ntBASIC8.43□□□□□ -1.06
Col17a1Q07563 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col17a1Q07563 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
Col17a1Q07563 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col17a1Q07563 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col17a1Q07563 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col17a1Q07563 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col17a1Q07563 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Col17a1Q07563 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.43□□□□□ -1.06
Col17a1Q07563 Gm42645-201ENSMUST00000201573 1627 ntBASIC8.43□□□□□ -1.06
Col17a1Q07563 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Col17a1Q07563 Gm37588-201ENSMUST00000195024 2496 ntBASIC8.43□□□□□ -1.06
Col17a1Q07563 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col17a1Q07563 Gm15182-201ENSMUST00000120832 1676 ntBASIC8.43□□□□□ -1.06
Col17a1Q07563 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC8.43□□□□□ -1.06
Col17a1Q07563 Gm24170-201ENSMUST00000104124 133 ntBASIC8.43□□□□□ -1.06
Col17a1Q07563 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Col17a1Q07563 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC8.43□□□□□ -1.06
Col17a1Q07563 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC8.43□□□□□ -1.06
Col17a1Q07563 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC8.43□□□□□ -1.06
Col17a1Q07563 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC8.43□□□□□ -1.06
Col17a1Q07563 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC8.43□□□□□ -1.06
Col17a1Q07563 Gm44134-202ENSMUST00000204777 545 ntBASIC8.43□□□□□ -1.06
Col17a1Q07563 AC102291.1-201ENSMUST00000227164 529 ntBASIC8.43□□□□□ -1.06
Col17a1Q07563 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col17a1Q07563 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col17a1Q07563 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC8.43□□□□□ -1.06
Col17a1Q07563 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Col17a1Q07563 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Col17a1Q07563 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Col17a1Q07563 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Col17a1Q07563 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Col17a1Q07563 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Gm44742-201ENSMUST00000207190 1412 ntBASIC8.42□□□□□ -1.06
Col17a1Q07563 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC8.42□□□□□ -1.06
Col17a1Q07563 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Col17a1Q07563 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Col17a1Q07563 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Gm25420-201ENSMUST00000104216 127 ntBASIC8.42□□□□□ -1.06
Col17a1Q07563 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Gm25103-201ENSMUST00000122671 318 ntBASIC8.42□□□□□ -1.06
Col17a1Q07563 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC8.42□□□□□ -1.06
Col17a1Q07563 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Gm18427-201ENSMUST00000195422 515 ntBASIC8.42□□□□□ -1.06
Col17a1Q07563 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Gm7093-201ENSMUST00000223004 581 ntBASIC8.42□□□□□ -1.06
Col17a1Q07563 AC125399.1-201ENSMUST00000224236 595 ntBASIC8.42□□□□□ -1.06
Col17a1Q07563 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Col17a1Q07563 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC8.42□□□□□ -1.06
Col17a1Q07563 Gm45516-201ENSMUST00000211588 4182 ntBASIC8.42□□□□□ -1.06
Col17a1Q07563 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Col17a1Q07563 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Col17a1Q07563 AC117608.2-201ENSMUST00000224124 1363 ntBASIC8.42□□□□□ -1.06
Col17a1Q07563 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
Col17a1Q07563 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col17a1Q07563 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col17a1Q07563 AC144772.2-201ENSMUST00000228830 2859 ntBASIC8.41□□□□□ -1.06
Col17a1Q07563 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Col17a1Q07563 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col17a1Q07563 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC8.41□□□□□ -1.06
Col17a1Q07563 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col17a1Q07563 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col17a1Q07563 AC154329.1-201ENSMUST00000224408 3129 ntBASIC8.41□□□□□ -1.06
Col17a1Q07563 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Col17a1Q07563 Gm13501-201ENSMUST00000118477 979 ntBASIC8.41□□□□□ -1.06
Col17a1Q07563 Gm14998-201ENSMUST00000120502 495 ntBASIC8.41□□□□□ -1.06
Col17a1Q07563 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC8.41□□□□□ -1.06
Col17a1Q07563 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col17a1Q07563 Gm23673-201ENSMUST00000157474 298 ntBASIC8.41□□□□□ -1.06
Col17a1Q07563 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Col17a1Q07563 Gm26595-201ENSMUST00000181585 484 ntBASIC8.41□□□□□ -1.06
Col17a1Q07563 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col17a1Q07563 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC8.41□□□□□ -1.06
Col17a1Q07563 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms