Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Rfx1P48377 Gm6171-201ENSMUST00000220760 645 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Rfx1P48377 Zfp640-202ENSMUST00000224116 1562 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 AC126275.1-201ENSMUST00000224881 446 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 AC154329.2-201ENSMUST00000225257 383 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 AC158521.1-201ENSMUST00000225295 660 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 AC121960.3-201ENSMUST00000227077 623 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Rfx1P48377 Gm25586-201ENSMUST00000082499 112 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Rfx1P48377 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC7.48□□□□□ -1.21
Rfx1P48377 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Rfx1P48377 Gm7108-201ENSMUST00000118038 3407 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Rfx1P48377 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Rfx1P48377 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC7.48□□□□□ -1.21
Rfx1P48377 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC7.48□□□□□ -1.21
Rfx1P48377 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Rfx1P48377 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.48□□□□□ -1.21
Rfx1P48377 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC7.48□□□□□ -1.21
Rfx1P48377 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Rfx1P48377 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 Gm7048-201ENSMUST00000199395 1891 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 Gm37897-201ENSMUST00000192613 3561 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC7.47□□□□□ -1.21
Rfx1P48377 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Rfx1P48377 Mir466n-201ENSMUST00000104798 94 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Gm2178-201ENSMUST00000104927 357 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Rfx1P48377 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 Gm25556-201ENSMUST00000158077 144 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Rfx1P48377 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Rfx1P48377 Gm8676-201ENSMUST00000184206 637 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Gm27538-201ENSMUST00000185065 294 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Gm3454-201ENSMUST00000185571 412 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC7.47□□□□□ -1.21
Rfx1P48377 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC7.47□□□□□ -1.21
Rfx1P48377 Gm28414-201ENSMUST00000190111 294 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC7.47□□□□□ -1.21
Rfx1P48377 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 Gm43315-201ENSMUST00000198120 313 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Gm43232-201ENSMUST00000201346 364 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Rfx1P48377 Gm45070-201ENSMUST00000208100 246 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Gm45409-201ENSMUST00000211486 252 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Gm18557-201ENSMUST00000218710 433 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Gm5176-202ENSMUST00000220267 583 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Gm18601-201ENSMUST00000220831 634 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Gm9321-201ENSMUST00000221179 778 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 AC101205.1-201ENSMUST00000227916 907 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Rfx1P48377 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Rfx1P48377 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Rfx1P48377 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Naip3-201ENSMUST00000118082 4208 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.47□□□□□ -1.21
Rfx1P48377 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC7.47□□□□□ -1.21
Rfx1P48377 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 AC167013.5-201ENSMUST00000227597 2947 ntBASIC7.47□□□□□ -1.21
Rfx1P48377 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Rfx1P48377 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Rfx1P48377 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Rfx1P48377 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Rfx1P48377 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC7.46□□□□□ -1.22
Rfx1P48377 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Rfx1P48377 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC7.46□□□□□ -1.22
Rfx1P48377 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Rfx1P48377 Gm7485-201ENSMUST00000119502 1109 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 Gm16511-201ENSMUST00000120019 564 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Rfx1P48377 Gm24422-201ENSMUST00000157800 119 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 Gm23077-201ENSMUST00000157854 116 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 Gm26037-201ENSMUST00000158150 311 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 Gm28597-201ENSMUST00000187664 666 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Rfx1P48377 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC7.46□□□□□ -1.22
Rfx1P48377 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 Gm6070-201ENSMUST00000207275 419 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC7.46□□□□□ -1.22
Rfx1P48377 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC7.46□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms