Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HttP42859 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HttP42859 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HttP42859 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HttP42859 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HttP42859 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HttP42859 Gm12322-201ENSMUST00000121605 389 ntBASIC5.36□□□□□ -1.55
HttP42859 Gm11679-201ENSMUST00000121830 779 ntBASIC5.36□□□□□ -1.55
HttP42859 Gm25965-201ENSMUST00000157170 93 ntBASIC5.36□□□□□ -1.55
HttP42859 Gm42776-201ENSMUST00000198031 406 ntBASIC5.36□□□□□ -1.55
HttP42859 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.36□□□□□ -1.55
HttP42859 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.36□□□□□ -1.55
HttP42859 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HttP42859 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC5.36□□□□□ -1.55
HttP42859 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.36□□□□□ -1.55
HttP42859 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.36□□□□□ -1.55
HttP42859 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HttP42859 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.36□□□□□ -1.55
HttP42859 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HttP42859 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HttP42859 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.36□□□□□ -1.55
HttP42859 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HttP42859 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HttP42859 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
HttP42859 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
HttP42859 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
HttP42859 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.36□□□□□ -1.55
HttP42859 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.36□□□□□ -1.55
HttP42859 Gm5924-201ENSMUST00000132554 871 ntBASIC5.36□□□□□ -1.55
HttP42859 Gm11394-201ENSMUST00000181421 517 ntBASIC5.36□□□□□ -1.55
HttP42859 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HttP42859 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC5.36□□□□□ -1.55
HttP42859 Gm20940-201ENSMUST00000197308 360 ntBASIC5.36□□□□□ -1.55
HttP42859 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.36□□□□□ -1.55
HttP42859 AC124408.1-201ENSMUST00000228938 707 ntBASIC5.36□□□□□ -1.55
HttP42859 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.36□□□□□ -1.55
HttP42859 Gm22868-201ENSMUST00000083955 164 ntBASIC5.36□□□□□ -1.55
HttP42859 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HttP42859 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.35□□□□□ -1.55
HttP42859 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HttP42859 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Gm45885-202ENSMUST00000211520 1383 ntBASIC5.35□□□□□ -1.55
HttP42859 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HttP42859 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HttP42859 Gm12231-201ENSMUST00000119447 695 ntBASIC5.35□□□□□ -1.55
HttP42859 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HttP42859 Gm44243-201ENSMUST00000204323 692 ntBASIC5.35□□□□□ -1.55
HttP42859 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC5.35□□□□□ -1.55
HttP42859 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC5.35□□□□□ -1.55
HttP42859 Gm4501-201ENSMUST00000207330 551 ntBASIC5.35□□□□□ -1.55
HttP42859 Gm4558-201ENSMUST00000207886 521 ntBASIC5.35□□□□□ -1.55
HttP42859 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HttP42859 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.35□□□□□ -1.55
HttP42859 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HttP42859 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HttP42859 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HttP42859 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Gm22473-201ENSMUST00000104114 132 ntBASIC5.35□□□□□ -1.55
HttP42859 Gm12486-201ENSMUST00000120887 541 ntBASIC5.35□□□□□ -1.55
HttP42859 Gm23168-201ENSMUST00000157156 143 ntBASIC5.35□□□□□ -1.55
HttP42859 Mir7022-201ENSMUST00000183749 61 ntBASIC5.35□□□□□ -1.55
HttP42859 Gm45007-201ENSMUST00000206237 366 ntBASIC5.35□□□□□ -1.55
HttP42859 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC5.35□□□□□ -1.55
HttP42859 AC155266.1-201ENSMUST00000220762 904 ntBASIC5.35□□□□□ -1.55
HttP42859 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HttP42859 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HttP42859 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HttP42859 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.35□□□□□ -1.55
HttP42859 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HttP42859 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HttP42859 Gm8051-201ENSMUST00000120464 466 ntBASIC5.34□□□□□ -1.55
HttP42859 Gm15263-201ENSMUST00000121556 642 ntBASIC5.34□□□□□ -1.55
HttP42859 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HttP42859 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HttP42859 Gm22637-201ENSMUST00000158144 283 ntBASIC5.34□□□□□ -1.55
HttP42859 Gm26828-201ENSMUST00000180640 172 ntBASIC5.34□□□□□ -1.55
HttP42859 Gm2147-201ENSMUST00000193588 639 ntBASIC5.34□□□□□ -1.55
HttP42859 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
HttP42859 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.34□□□□□ -1.55
HttP42859 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.34□□□□□ -1.55
HttP42859 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HttP42859 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.34□□□□□ -1.55
HttP42859 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HttP42859 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms