Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm13081-201ENSMUST00000121527 5599 ntBASIC7.45□□□□□ -1.22
Col18a1P39061 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col18a1P39061 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.45□□□□□ -1.22
Col18a1P39061 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col18a1P39061 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col18a1P39061 Gm37760-201ENSMUST00000194726 3841 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col18a1P39061 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Col18a1P39061 Gm7206-201ENSMUST00000117730 508 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Gm14610-201ENSMUST00000118358 966 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col18a1P39061 Gm22916-201ENSMUST00000157616 119 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Gm22367-201ENSMUST00000178930 132 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Gm28503-201ENSMUST00000185966 147 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Col18a1P39061 Gm20885-201ENSMUST00000190192 654 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Gm37708-201ENSMUST00000192337 895 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Gm29740-201ENSMUST00000193182 655 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Gm36866-201ENSMUST00000193343 657 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Gm36047-201ENSMUST00000193659 657 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Gm20857-201ENSMUST00000194766 657 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Gm20858-201ENSMUST00000195459 657 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC7.44□□□□□ -1.22
Col18a1P39061 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col18a1P39061 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col18a1P39061 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC7.44□□□□□ -1.22
Col18a1P39061 CT025665.1-201ENSMUST00000215251 1199 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 AC139758.1-201ENSMUST00000226573 930 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Col18a1P39061 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col18a1P39061 AC132852.1-201ENSMUST00000214683 2324 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col18a1P39061 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
Col18a1P39061 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col18a1P39061 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Fam35a-206ENSMUST00000228626 3100 ntBASIC7.44□□□□□ -1.22
Col18a1P39061 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col18a1P39061 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
Col18a1P39061 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col18a1P39061 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Col18a1P39061 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col18a1P39061 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm15238-201ENSMUST00000119938 1296 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gm25291-201ENSMUST00000122795 144 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gm22789-201ENSMUST00000157884 130 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC7.43□□□□□ -1.22
Col18a1P39061 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Col18a1P39061 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm20056-201ENSMUST00000194813 519 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm29736-201ENSMUST00000198189 385 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm6051-201ENSMUST00000201529 352 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm44656-201ENSMUST00000208428 490 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC7.43□□□□□ -1.22
Col18a1P39061 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Col18a1P39061 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col18a1P39061 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC7.43□□□□□ -1.22
Col18a1P39061 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col18a1P39061 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Col18a1P39061 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col18a1P39061 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm37216-201ENSMUST00000193817 3478 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gm33378-201ENSMUST00000219831 2758 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gm8401-201ENSMUST00000120248 1739 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm13733-201ENSMUST00000117290 535 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gm26153-201ENSMUST00000157433 127 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gm20453-201ENSMUST00000173968 226 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm28195-201ENSMUST00000186992 372 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gm36994-201ENSMUST00000192941 492 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gm44225-201ENSMUST00000203582 186 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 111.4 ms