Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.31□□□□□ -1.4
Usp4P35123 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Usp4P35123 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.31□□□□□ -1.4
Usp4P35123 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Usp4P35123 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 Gm13835-201ENSMUST00000118459 685 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm11902-201ENSMUST00000118849 270 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Defa-ps1-201ENSMUST00000119062 282 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm13818-201ENSMUST00000119441 511 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm11708-201ENSMUST00000119530 832 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Klra11-ps-201ENSMUST00000122033 810 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Defa-ps6-201ENSMUST00000122172 282 ntBASIC6.31□□□□□ -1.4
Usp4P35123 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 Mup-ps4-201ENSMUST00000151005 539 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm25219-201ENSMUST00000157545 330 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm23896-201ENSMUST00000158109 130 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm24393-201ENSMUST00000158135 97 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.31□□□□□ -1.4
Usp4P35123 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Usp4P35123 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC6.31□□□□□ -1.4
Usp4P35123 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.31□□□□□ -1.4
Usp4P35123 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.31□□□□□ -1.4
Usp4P35123 Gm20620-201ENSMUST00000177528 168 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm23450-201ENSMUST00000178285 91 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm17048-201ENSMUST00000179266 847 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm21542-201ENSMUST00000182307 993 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm27210-201ENSMUST00000184263 402 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm4412-201ENSMUST00000186660 433 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Usp4P35123 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 Gm17934-201ENSMUST00000192818 422 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm37966-201ENSMUST00000193122 326 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Usp4P35123 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 Gm5288-201ENSMUST00000198323 1119 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm42652-201ENSMUST00000199073 614 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm43233-201ENSMUST00000200491 616 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm5306-201ENSMUST00000203325 757 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Usp4P35123 Gm8556-201ENSMUST00000210437 664 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm45789-201ENSMUST00000213038 364 ntBASIC6.31□□□□□ -1.4
Usp4P35123 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.31□□□□□ -1.4
Usp4P35123 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 AC164424.1-201ENSMUST00000221690 170 ntBASIC6.31□□□□□ -1.4
Usp4P35123 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.31□□□□□ -1.4
Usp4P35123 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.31□□□□□ -1.4
Usp4P35123 AC150560.3-201ENSMUST00000227442 455 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Usp4P35123 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Usp4P35123 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm23686-201ENSMUST00000083241 164 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Gm23104-201ENSMUST00000083722 104 ntBASIC6.31□□□□□ -1.4
Usp4P35123 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Usp4P35123 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Usp4P35123 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Usp4P35123 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Usp4P35123 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Usp4P35123 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Usp4P35123 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.31□□□□□ -1.4
Usp4P35123 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.31□□□□□ -1.4
Usp4P35123 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp4P35123 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Usp4P35123 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Usp4P35123 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Usp4P35123 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Usp4P35123 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.3□□□□□ -1.4
Usp4P35123 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Usp4P35123 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
Usp4P35123 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Usp4P35123 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Usp4P35123 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Usp4P35123 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.3□□□□□ -1.4
Usp4P35123 Gm4596-201ENSMUST00000117197 442 ntBASIC6.3□□□□□ -1.4
Usp4P35123 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.3□□□□□ -1.4
Usp4P35123 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC6.3□□□□□ -1.4
Usp4P35123 Gm13679-201ENSMUST00000118678 484 ntBASIC6.3□□□□□ -1.4
Usp4P35123 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Usp4P35123 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.3□□□□□ -1.4
Usp4P35123 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Usp4P35123 Gm26346-201ENSMUST00000157525 329 ntBASIC6.3□□□□□ -1.4
Usp4P35123 Gm26410-201ENSMUST00000157670 261 ntBASIC6.3□□□□□ -1.4
Usp4P35123 Gm25374-201ENSMUST00000158158 101 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms