Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.3□□□□□ -1.72
Sdc1P18828 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm15394-201ENSMUST00000119656 1308 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Sdc1P18828 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Gm12717-201ENSMUST00000118427 983 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Gm12401-201ENSMUST00000118435 228 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Gm14560-201ENSMUST00000118672 375 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Gm13172-201ENSMUST00000118685 256 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Gm14874-201ENSMUST00000118995 438 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Gm15754-201ENSMUST00000119191 478 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Gm15741-201ENSMUST00000119401 754 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Gm11278-201ENSMUST00000121002 997 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Gm5383-201ENSMUST00000121177 617 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Gm2986-201ENSMUST00000121603 382 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm9006-201ENSMUST00000165520 841 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Sdc1P18828 Mir3058-201ENSMUST00000175126 91 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm29668-201ENSMUST00000187802 315 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC4.3□□□□□ -1.72
Sdc1P18828 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 AC154634.2-201ENSMUST00000225983 1184 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm24411-201ENSMUST00000083428 131 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Gm23502-201ENSMUST00000083902 145 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Sdc1P18828 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Sdc1P18828 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Sdc1P18828 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.29□□□□□ -1.72
Sdc1P18828 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Sdc1P18828 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Sdc1P18828 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Sdc1P18828 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Sdc1P18828 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Sdc1P18828 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Sdc1P18828 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Sdc1P18828 Gm13590-201ENSMUST00000120183 1588 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Gm18186-201ENSMUST00000192239 1580 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Sdc1P18828 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Sdc1P18828 Gm22267-201ENSMUST00000104008 131 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Gm6654-201ENSMUST00000118950 348 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Gm16423-201ENSMUST00000120078 947 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Gm14369-201ENSMUST00000121355 285 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Gm22958-201ENSMUST00000122512 184 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC4.29□□□□□ -1.72
Sdc1P18828 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Sdc1P18828 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Sdc1P18828 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Sdc1P18828 Gm26923-201ENSMUST00000182615 996 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Gm19206-201ENSMUST00000186401 827 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC4.29□□□□□ -1.72
Sdc1P18828 Gm6631-201ENSMUST00000193699 559 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 AC122844.1-201ENSMUST00000195971 107 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC4.29□□□□□ -1.72
Sdc1P18828 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Sdc1P18828 Gm9038-201ENSMUST00000203400 604 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Gm45596-201ENSMUST00000209279 434 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Gm9652-201ENSMUST00000209345 163 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Sdc1P18828 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Sdc1P18828 Gm45724-201ENSMUST00000213031 420 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC4.29□□□□□ -1.72
Sdc1P18828 Gm18899-201ENSMUST00000217663 546 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 AC132384.3-201ENSMUST00000219709 472 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms