Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm29592-201ENSMUST00000189434 370 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Gm38185-201ENSMUST00000193195 694 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Mir6516-201ENSMUST00000196236 110 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC6.18□□□□□ -1.42
Col1a1P11087 Gm6719-201ENSMUST00000202067 335 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Gm44307-201ENSMUST00000204466 764 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Gm44757-201ENSMUST00000206373 157 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 AC134439.1-201ENSMUST00000220923 600 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC6.18□□□□□ -1.42
Col1a1P11087 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Col1a1P11087 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Col1a1P11087 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col1a1P11087 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Col1a1P11087 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.18□□□□□ -1.42
Col1a1P11087 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col1a1P11087 Gm43567-201ENSMUST00000197581 1978 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col1a1P11087 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col1a1P11087 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col1a1P11087 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col1a1P11087 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col1a1P11087 Gm37593-201ENSMUST00000191669 3254 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Col1a1P11087 Gm23593-201ENSMUST00000104309 120 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Gm16149-201ENSMUST00000117631 309 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Gm11633-201ENSMUST00000118176 444 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Gm4852-201ENSMUST00000121202 729 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Magea9-ps-201ENSMUST00000140655 732 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 Gm25348-201ENSMUST00000158961 111 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Magea9-ps-202ENSMUST00000167328 899 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC6.17□□□□□ -1.42
Col1a1P11087 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.17□□□□□ -1.42
Col1a1P11087 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 Gm2497-201ENSMUST00000189539 601 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.17□□□□□ -1.42
Col1a1P11087 Gm29072-201ENSMUST00000191149 678 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Gm43237-201ENSMUST00000196835 1044 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC6.17□□□□□ -1.42
Col1a1P11087 Gm32308-201ENSMUST00000203053 280 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
Col1a1P11087 Gm44603-201ENSMUST00000206820 367 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 Gm3816-201ENSMUST00000209803 433 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col1a1P11087 AC109180.1-201ENSMUST00000218676 398 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 AC158803.3-201ENSMUST00000220024 211 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 AC154239.1-201ENSMUST00000228565 406 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Col1a1P11087 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Col1a1P11087 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col1a1P11087 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col1a1P11087 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col1a1P11087 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.17□□□□□ -1.42
Col1a1P11087 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col1a1P11087 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC6.16□□□□□ -1.42
Col1a1P11087 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col1a1P11087 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col1a1P11087 Gm22468-201ENSMUST00000116680 120 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm26248-201ENSMUST00000116700 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm26137-201ENSMUST00000116701 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm26190-201ENSMUST00000116704 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm24617-201ENSMUST00000116705 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm25778-201ENSMUST00000116713 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm25774-201ENSMUST00000116717 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm22102-201ENSMUST00000116730 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm23177-201ENSMUST00000116784 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm24193-201ENSMUST00000116801 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm22488-201ENSMUST00000116811 127 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm24744-201ENSMUST00000116833 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm24427-201ENSMUST00000116896 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm22346-201ENSMUST00000116918 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm23606-201ENSMUST00000116938 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm22029-201ENSMUST00000116940 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm26298-201ENSMUST00000116956 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm23844-201ENSMUST00000116959 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm24484-201ENSMUST00000117009 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm25347-201ENSMUST00000117026 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm22112-201ENSMUST00000117032 121 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm11617-201ENSMUST00000119609 639 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm12007-201ENSMUST00000120978 597 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Gm23171-201ENSMUST00000157159 264 ntBASIC6.16□□□□□ -1.42
Col1a1P11087 Ear-ps9-201ENSMUST00000161963 460 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms