Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Col6a4A2AX52 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Gm25418-201ENSMUST00000104214 129 ntBASIC4.45□□□□□ -1.7
Col6a4A2AX52 Gm14874-201ENSMUST00000118995 438 ntBASIC4.45□□□□□ -1.7
Col6a4A2AX52 Mir1907-201ENSMUST00000122509 90 ntBASIC4.45□□□□□ -1.7
Col6a4A2AX52 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a4A2AX52 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Gm26170-201ENSMUST00000158419 148 ntBASIC4.45□□□□□ -1.7
Col6a4A2AX52 Gm26167-201ENSMUST00000158423 253 ntBASIC4.45□□□□□ -1.7
Col6a4A2AX52 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Gm2367-201ENSMUST00000192374 472 ntBASIC4.45□□□□□ -1.7
Col6a4A2AX52 Mir194-1-201ENSMUST00000083647 67 ntBASIC4.45□□□□□ -1.7
Col6a4A2AX52 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Gm42508-201ENSMUST00000199972 3292 ntBASIC4.45□□□□□ -1.7
Col6a4A2AX52 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Gm37023-201ENSMUST00000192895 2426 ntBASIC4.45□□□□□ -1.7
Col6a4A2AX52 AC164567.3-201ENSMUST00000217743 2869 ntBASIC4.45□□□□□ -1.7
Col6a4A2AX52 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.45□□□□□ -1.7
Col6a4A2AX52 Gm22367-201ENSMUST00000178930 132 ntBASIC4.45□□□□□ -1.7
Col6a4A2AX52 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a4A2AX52 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm11679-201ENSMUST00000121830 779 ntBASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm8221-201ENSMUST00000178052 564 ntBASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 AC122355.1-201ENSMUST00000228155 4184 ntBASIC4.44□□□□□ -1.7
Col6a4A2AX52 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.44□□□□□ -1.7
Col6a4A2AX52 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm8145-201ENSMUST00000118220 745 ntBASIC4.44□□□□□ -1.7
Col6a4A2AX52 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm25224-201ENSMUST00000158195 68 ntBASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.44□□□□□ -1.7
Col6a4A2AX52 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.44□□□□□ -1.7
Col6a4A2AX52 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm6051-201ENSMUST00000201529 352 ntBASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm43629-201ENSMUST00000201782 704 ntBASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Gm5215-201ENSMUST00000054380 405 ntBASIC4.44□□□□□ -1.7
Col6a4A2AX52 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col6a4A2AX52 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a4A2AX52 AC151971.5-201ENSMUST00000214422 3254 ntBASIC4.43□□□□□ -1.7
Col6a4A2AX52 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms