Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Clp1Q99LI9 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 CT010514.1-201ENSMUST00000214088 2969 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm29730-201ENSMUST00000192986 1396 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 Igkv13-87-201ENSMUST00000114214 286 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Gm14163-201ENSMUST00000117342 217 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Gm16511-201ENSMUST00000120019 564 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 n-R5s207-201ENSMUST00000122497 118 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC7□□□□□ -1.29
Clp1Q99LI9 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm23981-201ENSMUST00000157136 106 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Gm24910-201ENSMUST00000157289 272 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Gm20401-201ENSMUST00000173717 212 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Gm27960-201ENSMUST00000183445 184 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Gm27972-201ENSMUST00000184720 137 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm37828-201ENSMUST00000192496 432 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Igkv4-83-201ENSMUST00000196933 334 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 n-TStga1-201ENSMUST00000199903 109 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Gm44239-201ENSMUST00000204228 271 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Gm45514-201ENSMUST00000211531 689 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Gm18225-201ENSMUST00000216708 742 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC7□□□□□ -1.29
Clp1Q99LI9 AC119894.1-201ENSMUST00000220399 350 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Gm46312-201ENSMUST00000220961 420 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 AC141884.1-201ENSMUST00000226327 636 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7□□□□□ -1.29
Clp1Q99LI9 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC7□□□□□ -1.29
Clp1Q99LI9 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC7□□□□□ -1.29
Clp1Q99LI9 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC7□□□□□ -1.29
Clp1Q99LI9 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm12021-201ENSMUST00000121061 1746 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm37525-201ENSMUST00000193499 2871 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC7□□□□□ -1.29
Clp1Q99LI9 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm38375-201ENSMUST00000194610 2227 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm42492-201ENSMUST00000195780 2915 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clp1Q99LI9 Gm19552-201ENSMUST00000194744 2833 ntBASIC7□□□□□ -1.29
Clp1Q99LI9 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.99□□□□□ -1.29
Clp1Q99LI9 Gm6820-201ENSMUST00000188803 2173 ntBASIC6.99□□□□□ -1.29
Clp1Q99LI9 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Gm38189-201ENSMUST00000194495 1457 ntBASIC6.99□□□□□ -1.29
Clp1Q99LI9 Gm44678-201ENSMUST00000207828 2775 ntBASIC6.99□□□□□ -1.29
Clp1Q99LI9 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.99□□□□□ -1.29
Clp1Q99LI9 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Gm25876-201ENSMUST00000104329 119 ntBASIC6.99□□□□□ -1.29
Clp1Q99LI9 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Gm20453-201ENSMUST00000173968 226 ntBASIC6.99□□□□□ -1.29
Clp1Q99LI9 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Clp1Q99LI9 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.99□□□□□ -1.29
Clp1Q99LI9 AC117237.1-201ENSMUST00000224035 395 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms