Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Lsm1Q8VC85 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm25595-201ENSMUST00000102273 97 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm24235-201ENSMUST00000104319 129 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm23211-201ENSMUST00000122717 308 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm12833-201ENSMUST00000136112 477 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm24731-201ENSMUST00000158227 131 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm22326-201ENSMUST00000158897 351 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm16102-201ENSMUST00000160955 420 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm17907-201ENSMUST00000173150 710 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm28507-201ENSMUST00000189737 703 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm8719-201ENSMUST00000203602 534 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 CT009515.3-201ENSMUST00000226509 671 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Lsm1Q8VC85 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
Lsm1Q8VC85 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.58
Lsm1Q8VC85 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Lsm1Q8VC85 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Lsm1Q8VC85 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.15□□□□□ -1.58
Lsm1Q8VC85 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Lsm1Q8VC85 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
Lsm1Q8VC85 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.15□□□□□ -1.58
Lsm1Q8VC85 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Lsm1Q8VC85 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm24265-201ENSMUST00000101833 141 ntBASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm22122-201ENSMUST00000175147 200 ntBASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm24407-201ENSMUST00000177864 141 ntBASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm5058-201ENSMUST00000187331 463 ntBASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm37700-201ENSMUST00000192617 965 ntBASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm2040-201ENSMUST00000202979 289 ntBASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Gm45157-201ENSMUST00000208729 401 ntBASIC5.15□□□□□ -1.59
Lsm1Q8VC85 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.15□□□□□ -1.59
Lsm1Q8VC85 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.15□□□□□ -1.59
Lsm1Q8VC85 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lsm1Q8VC85 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms