Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm25139-201ENSMUST00000083247 210 ntBASIC7.23□□□□□ -1.25
Sf3b2Q3UJB0 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sf3b2Q3UJB0 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Sf3b2Q3UJB0 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
Sf3b2Q3UJB0 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Sf3b2Q3UJB0 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.23□□□□□ -1.25
Sf3b2Q3UJB0 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.23□□□□□ -1.25
Sf3b2Q3UJB0 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sf3b2Q3UJB0 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sf3b2Q3UJB0 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
Sf3b2Q3UJB0 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
Sf3b2Q3UJB0 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.23□□□□□ -1.25
Sf3b2Q3UJB0 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Sf3b2Q3UJB0 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Sf3b2Q3UJB0 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 AC153494.1-201ENSMUST00000218664 3041 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm23485-201ENSMUST00000104181 155 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm16082-201ENSMUST00000115992 377 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm7206-201ENSMUST00000117730 508 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm11633-201ENSMUST00000118176 444 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm25665-201ENSMUST00000157695 110 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm22254-201ENSMUST00000179186 110 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm29072-201ENSMUST00000191149 678 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm44307-201ENSMUST00000204466 764 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm46191-201ENSMUST00000218899 433 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 AC154450.1-201ENSMUST00000220911 485 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 CT025552.1-201ENSMUST00000224561 521 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm23511-201ENSMUST00000083084 164 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm8979-201ENSMUST00000183386 7296 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 AC132852.1-201ENSMUST00000214683 2324 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm38284-201ENSMUST00000194803 4539 ntBASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sf3b2Q3UJB0 Gm42508-201ENSMUST00000199972 3292 ntBASIC7.21□□□□□ -1.25
Sf3b2Q3UJB0 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Sf3b2Q3UJB0 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Sf3b2Q3UJB0 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
Sf3b2Q3UJB0 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Sf3b2Q3UJB0 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Sf3b2Q3UJB0 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.25
Sf3b2Q3UJB0 Gm36931-201ENSMUST00000192997 4801 ntBASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Gm22020-201ENSMUST00000104358 136 ntBASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Gm23839-201ENSMUST00000116957 109 ntBASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Gm11346-201ENSMUST00000118346 704 ntBASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Gm14037-201ENSMUST00000120576 313 ntBASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 n-R5s48-201ENSMUST00000122482 110 ntBASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Gm42542-201ENSMUST00000197978 268 ntBASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 AC123064.1-201ENSMUST00000218950 406 ntBASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Gm2099-201ENSMUST00000220979 412 ntBASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 n-R5s62-201ENSMUST00000082780 96 ntBASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 AC102847.2-201ENSMUST00000227799 2906 ntBASIC7.21□□□□□ -1.26
Sf3b2Q3UJB0 Gm14895-201ENSMUST00000121858 1361 ntBASIC7.2□□□□□ -1.26
Sf3b2Q3UJB0 Gm13590-201ENSMUST00000120183 1588 ntBASIC7.2□□□□□ -1.26
Sf3b2Q3UJB0 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sf3b2Q3UJB0 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Sf3b2Q3UJB0 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Sf3b2Q3UJB0 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms